Selaginella moellendorffii: SELMODRAFT_175519
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Entry
SELMODRAFT_175519 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18752
transportin-1
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_175519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_175519
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_175519
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_175519
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SELMODRAFT_175519
Pre-60S particles
SELMODRAFT_175519
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IPO5
HEAT_2
HEAT_GCN1
TOR1L1_N
TPR_DNAAF5
TPR_IMB1
IBN_N
Cnd1
HEAT_MROH2B_C
HEAT_EF3_N
Arm
PSME4_C
PDS5
Proteasom_PSMB
Phage_T4_Y05C
DNA_alkylation
Motif
Other DBs
NCBI-GeneID:
9648825
NCBI-ProteinID:
XP_002976395
JGI:
175519
UniProt:
D8RYY9
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MDQRSPWQPREEGVNEICALLQEGKRPNADQARIFEQLQRCSQVPDFNNYLVFILCRSEG
QSVVVRQSAGLLLKNNLKSSYKRLPGVYQQYIKSELLPRLGSPNRELRATVGTVVSVIIQ
EGQLQTWPELFQGILECLESNDYNHMEGALDALSKICEDAADQLDQVVPGLAQKPSDVFI
PRLLKFFSSSHVTLRKLALGAVNQFINFMPQALFVNMDNYLQGLFTLSNDPAPEVRKLVC
AALVRLLEMDAEILRPHMKSVIEYMLQANNDPDPEVALGSCEFWTAFCEAQLPLELLRDA
LPRLIGVLLTNMIYADDDEALLDSQDDESVPDSEQNLKPRFHQSRVHGNETDDDEDTDEI
ISSWNLRKCSAAGLDTLSTLFGDDILPLLMPLVEARLSNSSDDKWKDREAAVLALGAVAQ
GCINGLLPHLPQMIAFLTPLLEDKHPLVRGITCWTLSRYSKWIVQAASETNGLQQFDSVL
TGLLRQVIGTNKQVQEAACSAFATLEEEAAEEVILQHHLEVILQHLMFAFSKYQRRNLRI
LYDAIGTLADAVGGDLNEPKYLNILMPPLIAKWQQLADNDKDLFPLLECFTSIAQALGSG
FAQYAEPIFARCIRVIRTQEVAKADPGRAGVQYDKEFIVCSLDLLSGLAEGLGSNMESLV
VRSDLRDLLFYCCGDEAPEVRQSALALLGDLAKACAGHLQPRMGDFLSLAARQLDVEHVS
VSNNACWAIGEIAIKVGKEIAPIVMGVISCLVPILSSVENVNKSMLENSAITLGRLGWVC
PELVAPHIDHFMKIWCQSLAMVRDDIEKEDAFRGLCAMVRLNPGGAAKYFGSICEAIGSW
HEIRSAELRSEITQVLHGFKQMLGGSWEQYFSYLDPGTQEKLKRRYGL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagatcgccatggcagccgcgggaggagggcgtcaacgaaatctgcgcgctg
ctccaggagggcaagcggcccaacgccgaccaggcgcggattttcgagcagctccagcgc
tgcagccaggtcccggatttcaacaattacctcgtcttcatcctctgccgcagcgaggga
caatcagtggtagtccgacagagcgctggattgctactgaaaaacaacttaaaatcgtcc
tacaaacgtctccctggcgtctaccagcaatatatcaagtcggagcttcttcctcgactt
ggatctccaaacagggaactacgtgccaccgtcgggaccgtcgtgagtgtgatcatccag
gaaggccagctccagacgtggcccgagttgttccaagggattctagagtgcctcgagagc
aacgattataaccacatggaaggagcgcttgacgcattgtctaagatttgtgaggatgcc
gccgatcaactagaccaagttgtcccaggactagcacagaaaccgtctgatgtgtttatt
ccgcggctgctgaagttcttctcgtcgtctcacgtaacgctaagaaagcttgcgctgggc
gcggtgaaccaatttattaatttcatgccccaggcactctttgttaacatggataactac
cttcaaggtctttttacgctttccaacgatcctgcgcctgaagtgaggaaattggtgtgt
gcggcgctcgttcgtttgttggagatggatgcagaaattctccggcctcacatgaaaagt
gtaattgaatatatgttacaagcaaacaatgatccagatccagaagtagcgctagggtca
tgtgagttctggacggcattttgtgaagcacagctacctttggaacttttaagagacgcc
ctacctcgactaattggagttcttctaacaaatatgatatatgcagatgatgatgaagct
ctgctcgactctcaggacgatgaaagcgtacccgactcggagcagaacttaaagcctaga
tttcatcaatcacgagttcatggaaatgaaactgatgatgatgaggacacggatgaaatt
ataagttcgtggaatttgcgcaagtgcagtgccgctggactggacactctatcgacatta
tttggcgacgatattttacctctcctcatgcccctagtagaggcaagactatcgaattcg
tcggatgataaatggaaagatcgcgaggcagcagttttggctctaggagctgttgctcaa
ggctgtataaatggtctccttccacaccttcctcagatgattgcattccttacaccactt
ctggaagacaagcatcctttggtcagagggatcacctgttggacactgtctcgttatagc
aaatggatagtccaggcagcaagtgaaacaaatggtctccaacagttcgatagtgtttta
acgggactacttcgacaagtcattggcaccaacaaacaagtacaagaagcagcctgctcc
gcgtttgctacgcttgaagaagaagcggcagaagaagttattcttcaacatcatcttgaa
gtcattctacaacatcttatgtttgcttttagtaaataccagcgccgtaacctacgaatt
ttgtacgatgccatcggaacgctagcagatgcagtgggtggagaccttaatgagcccaag
tatctcaatatactgatgccaccattgatagcaaaatggcaacagctcgccgataatgac
aaagatctatttccacttctagaatgttttacgtccatcgcacaggcattaggctctgga
tttgcgcagtacgcagaaccgatttttgccagatgtattcgagttattcgcacgcaggaa
gttgcgaaggctgatcctggaagggccggtgtgcaatatgacaaggaattcatcgtgtgc
tcactcgatctactttctggtttagctgaaggtctgggaagcaacatggagagcttggtt
gtgagaagtgatctcagagatctcttgttttattgctgcggcgacgaagcaccagaagtt
cgtcaaagtgcacttgcgcttttgggagatcttgcaaaggcttgtgctggtcacctccaa
ccgaggatgggtgatttcctcagtcttgcagcaaggcaactggacgttgaacatgtttct
gtatctaacaatgcgtgctgggcgataggcgaaattgcaatcaaggttggaaaagagatt
gctcctattgtgatgggtgtcatcagttgcctggtgcccatactttcgagtgttgagaac
gtcaacaaatcgatgctggagaacagtgcgattacccttggaagactgggttgggtttgt
cccgagctcgttgctccacacattgatcactttatgaagatttggtgccaatcgttagcc
atggtccgcgacgatattgaaaaagaggacgctttccgaggactttgtgcaatggtaagg
ctgaatcccgggggtgctgcaaaatactttgggtctatatgcgaagccatcggtagctgg
catgaaattcgaagtgccgagctacgctccgagataacacaagtcctacacggattcaag
cagatgcttggtggatcctgggagcagtacttcagttacctcgatcctggcacccaagaa
aagctgaaaagaaggtacggcttgtga
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integrated database retrieval system
