Selaginella moellendorffii: SELMODRAFT_176012
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Entry
SELMODRAFT_176012 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smo03110
]
SELMODRAFT_176012
Chaperones and folding catalysts [BR:
smo03110
]
Heat shock proteins
HSP100
SELMODRAFT_176012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
UVR
Sigma54_activat
TniB
nSTAND3
AAA_18
AAA_28
AAA_14
Zeta_toxin
AAA_25
Mg_chelatase
IstB_IS21
NACHT
Torsin
DNA_pol3_delta2
DAHP_snth_FXD
AAA_23
Motif
Other DBs
NCBI-GeneID:
9638801
NCBI-ProteinID:
XP_002977161
JGI:
176012
UniProt:
D8S131
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MIRGSNHGQVRAAFITRTRTLQTYVGMRKPSPLDSLATRTCKDWNSVVSSVSTSGGRGAS
RGVVVAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGV
NLKEARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLR
EGEGVAARVLENLGADPGNIRTQVIRMVGESTEAVGASVGGGSSSNKMPTLEEYGTNLTK
LAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPE
TIEGKKVVTLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILVIDEVHTLIGAGAAEG
AIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVNVPEPTVDETIQILK
GLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE
ARDLDKELRQITKEKNEAVRGQDFEKAGELRDREMELKAQISAITEKGKEKSKAETEAGE
TGPLVTEADIQQIVSAWTGIPVEKVSTDESDRLMKMEETLHQRVIGQDEAVKAISRAIRR
ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMVRLDMSEFMERHTVSKL
IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT
VDFKNTLLIMTSNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKTLVNEELKQYFRPEFLN
RLDEIIVFRQLTKTEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGAR
PLRRAIMRLLEDSMAERMLSGEVKEGDSAIIDVDSEGNVTVLNGTAGTASSSSIEAPAGV
A
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgataagaggctcgaatcatggccaagtccgagcagcctttatcacgagaacgaggacg
ctacaaacgtatgtcggcatgcgaaagccaagtcccttggattctctagcaacgagaact
tgcaaggattggaactcagtggtttcaagtgtttccaccagcgggggaagaggtgcttct
cgtggtgtggttgtcgctatgttcgagcgcttcaccgagaaagccatcaaagttatcatg
ctggcacaggaggaggctcgcaggctgggacacaattttgtaggcactgaacagattctt
ctgggtcttatcggagaagggaccggtatcgctgccaaggttttgaagtccatgggagtt
aatctcaaggaagctcgggtggaggttgagaagattattggaaggggaagtggttttgtt
gccgtggagattcctttcactcctcgcgcaaagcgtgtattggagctttctctcgaagaa
gcacgccagctgggacacaattacatcgggtcggagcatttgcttcttggacttttgcga
gaaggagaaggtgtggcagctcgtgtgcttgaaaacctgggagctgatcctggaaacatt
cggacgcaggttattcgaatggtcggagagagcacagaggctgttggtgcgagtgtcggc
ggaggtagcagtagcaacaagatgccaacgttggaggagtatggcacgaacttgacaaaa
ctagcagaagaaggtaaactagatcccgtggtgggaaggcagcaacaaattgagcgtgtt
acacaaattcttggtcgtcggacgaagaacaatccttgtttgattggagaacctggcgtt
ggaaagactgcaattgcagaaggtcttgcgcagcgaattgcgacaggagacgttcctgaa
actattgaagggaaaaaggtcgttacattagacatgggactgcttgtcgccgggacaaag
taccgtggagaatttgaagagcgtctgaagaaactcatggaagaaattaagcaatccgat
gacattattcttgttatcgatgaggtgcatactttgattggagctggcgctgctgaagga
gccatcgatgcggccaatattttgaagcctgctcttgctcgtggcgaacttcagtgcatt
ggtgctacgaccattgacgagtacaggaaacatatagagaaggatcccgccctggaaaga
cgattccagccagttaatgtgccggagcccaccgtcgacgaaaccattcaaattctcaaa
ggactgcgagagcgatatgaaatccatcacaagctacggtacacagatgaggcgcttgtc
gctgctgctcagctgtcttaccagtatatcagcgaccgtttccttccggacaaggccatt
gatcttatcgacgaagctggttctcgcgtccgactgagacacgcacagctgcctgaagaa
gccagagatcttgacaaggaactcaggcagatcaccaaagagaaaaacgaagctgtgcgt
ggacaagactttgagaaggctggcgagctgagagatcgcgagatggagctcaaggcacag
atctcagccatcaccgagaaaggaaaagagaagtccaaggcagaaaccgaagccggcgaa
acaggtcccttggtcacagaggccgatatccagcagatagtgtcagcatggacaggcatt
cccgtggagaaagtctcaaccgacgagtcggacaggctgatgaaaatggaggagacgctc
caccagcgcgtcattggacaggacgaggcagtgaaggcgatcagccgagccatccgccgc
gctcgcgtcggcctcaagaacccgaaccgtcccattgcaagcttcattttctccggtcct
accggtgttggaaagtcggagctcgcaaaggccctggcggcgtactacttcggctcggag
gaggccatggtcaggctcgacatgagcgagttcatggaaagacacacggtgtcaaagctc
atcggctcgcctccgggatacgttggctacacagagggaggccagctcacagaggccgtg
aggaggcgtccttacaccgtggtgctgttcgacgagatcgagaaagctcacccggacgtg
ttcaacatgatgctccagatcctcgaggacgggaggctcacggacagcaagggacgaacg
gtggacttcaagaacacgctgctgatcatgacctccaacgtgggaagcagcgtgatcgag
aagggtggcggcggcattggcttccagctcgactacggcgagaaggacagcagctacaac
cggatcaagacgctggtgaacgaggagctcaagcagtacttcaggcccgagtttttgaac
cgtctggacgagatcatcgtgtttaggcagctgaccaagacggaggtgaaggagattgcg
gatatcatgctcaaggaggtgtttgagcggctcaagaagaaggagatcgatctccaggtg
acggagaggtttagagaccgggtggtggacgagggatatagcccgagctatggagctcgg
ccgctgcgaagggcgatcatgaggcttctcgaggatagcatggccgagaggatgctgtcc
ggggaggtgaaagagggcgattcggcgatcatagatgtggactctgaaggaaacgtgacg
gtgctgaacggaactgctggaaccgcatcgagctcgagcattgaagctcctgctggagtt
gcttaa
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