Selaginella moellendorffii: SELMODRAFT_176387
Help
Entry
SELMODRAFT_176387 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00906
Carotenoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Module
smo_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SELMODRAFT_176387
Enzymes [BR:
smo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
SELMODRAFT_176387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_oxidored
HI0933_like
GIDA
FAD_binding_2
Thi4
FAD_binding_3
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
9656171
NCBI-ProteinID:
XP_002977634
JGI:
176387
UniProt:
D8S2I2
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MAPAILAPCGVSARPTSPLPCFGAPSKQRSVRLGTHAGFAAAAVSTSQASFSAAPSDGSQ
GFFAEKRYDAIVVGAGIGGLVAASQLAIRGASVLLLEKYVIPGGSAGFFKRDGYTFDVGS
SVMFGFSDKGSINLITRALAAVGRKLELIPDPTTVHYHMPNNLSVRVHRDYEDFIGELVD
QFPHEEKGIRGFYGECWKVFNALNSLELKSLEEPLYLFGQFFRNPLACLTLAYYLPQNAG
DIARKYIKDPVLLSFIDTECFLVSTVDALCTPMINASMVICDRHFGGINYPVGGVGLIAQ
ELADGLIERGGEIRYKSNVKKILMEQNKAVGVQLADGTRLLGKTVISNATRWDTFEKLLD
SEMPDEERRFQTVYKKAPSFLSIHMGVKAEVLPQGTECHHLVLEDSWDNLEKPYGTIFLS
IPTVLDPSLAPEDRHILHIFTTAWADDWQGLSSSEYNDKKEAVADVIVKRLEAKLFPGLK
DATVLREVGTPKTHRRYLARDQGTYGPIPVGKPKGLLGMPFNTTAVEGLYCVGDSCFPGQ
GVIAVAFSGMMCGHRVAVDLGIEQGSRILDQALSKTLSWFRTLA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcaattctcgctccttgtggagtctccgcaagacccacgagtcctttgcct
tgttttggagctccaagcaagcagagatccgtgcgtcttggcacccacgccggttttgct
gcggcggctgtttccacgagccaagcttccttctcggcagctcctagcgatggaagccag
ggattcttcgcggagaagaggtacgatgcgattgtggttggcgctggaatcgggggcttg
gttgcagcaagtcaactcgcaatccggggcgcttcggtgctgctgctagagaagtacgtg
attcctggtggaagtgctgggtttttcaagcgagatggctacactttcgatgttggatcg
tccgtcatgtttggtttcagcgacaaggggtcgatcaatctgataactcgtgccttggct
gctgtcggacgaaagttggagctcatacccgatcccaccactgtccactaccatatgcca
aacaacttgtccgtgagagttcatcgagactacgaggatttcatcggcgagcttgtcgac
cagtttccacacgaagagaaaggaatacgaggcttctacggagaatgctggaaggttttt
aacgcattgaattcgctggagcttaaatctctcgaggagccgctctaccttttcggccag
tttttcagaaacccacttgcttgcttgactcttgcgtactatcttccccaaaatgctggt
gatattgcgaggaagtacatcaaagatccagttttgctgtcgtttatagataccgaatgc
ttcctcgtcagtaccgtcgacgcgttgtgtacaccaatgatcaatgcgagcatggtgatt
tgcgatcgacacttcggagggatcaactatcccgttggaggtgttggattgatagcacaa
gagctggcagacggcctgattgagagaggaggcgaaattcgctacaagtccaacgtgaag
aaaatcttgatggagcaaaacaaagcggttggcgtgcaactagcggatggaacacgattg
cttggcaaaacagtcatctccaatgctacgcgatgggatacttttgaaaagctgctcgat
tctgaaatgccagacgaagaacgacgcttccagacagtctacaagaaagctccatcgttt
ctctcaatacatatgggagtgaaagccgaagttttgcctcaaggaaccgagtgccatcat
ctcgttctcgaggactcgtgggataacctcgagaagccttatggtacgatcttcttgagc
attcccactgttttggatccctcgctagctccagaggatcgccatattcttcacatattt
accaccgcatgggccgatgattggcaagggttaagtagctcggagtacaatgacaagaag
gaggctgtggccgatgtgatcgttaagagactggaagcgaaactgtttcccggtctcaag
gacgcaacagttcttcgagaggtcgggacgcctaaaactcacagacgctatctcgctcga
gaccaaggaacttacggaccaatccctgttggaaagcccaaaggacttctcgggatgcca
ttcaacacaacagcagtggaaggactatactgcgttggagatagctgctttcccggccaa
ggagtcattgcggtagccttctctggaatgatgtgtggtcacagagtggctgtagatctc
ggcatcgagcaaggctcacggattttggaccaagcgctgagcaaaacgctgtcatggttt
agaacgctggcttaa
DBGET
integrated database retrieval system
