Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12586 | exosome complex component RRP43 |
|
Organism |
smo Selaginella moellendorffii
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:smo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_176463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:smo03019]
SELMODRAFT_176463
Messenger RNA biogenesis [BR:smo03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SELMODRAFT_176463
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
291 aa
MADDVEVDAFKRLYPAQFLERYLDASVRPDGRPLTRSRPTSVSFNAVSSADGSALVKIGN
TTMLAGAKLETMEPAADTPDQGCLSVDFVMPPICSPRVRPGRPAEEAYVITEQLQNALLS
SGVVDLRELSIVSGKAAWMIYLDVYCLDADGSLLDAALLASVAALAHLQVPAICVRSEGK
ITKAPPDAQASSDGIEFTQPRRLNLGEFPFALTVAMNQKSLIADPTAEEEAILDTKMIVI
LNSSQKIIALHKAGGSTTASTATIQDCLALAMRRRKTLQKVLEEALRKSTK |
NT seq |
876 nt +upstreamnt +downstreamnt
atggcggacgatgtcgaggtggatgcgttcaagcgcctgtatcccgcgcagtttctcgag
cgctacctggatgcatcggtgcggccggatgggaggccgctcacgcgatcgcgcccgacg
tcggtgtcgttcaacgctgtgtcgtcggcggacggatcggcgcttgtcaagattggaaac
acgacaatgctggctggagcgaagctagagacgatggagccggctgctgatacacccgat
caaggctgcctgtctgtagatttcgtaatgccaccgatttgctcgcctcgagtgaggcca
ggaaggccagcagaggaggcatatgtcataacggagcagctgcaaaatgccctcttgagc
tccggtgttgtcgatttacgtgagctctcgatcgtcagtggtaaagccgcttggatgatc
tatctggacgtttattgcttagacgccgatggatcacttcttgacgcagcactgctcgcg
tcagtagctgctctagcgcatttacaggtacccgcgatctgtgtaagaagtgagggaaag
atcacgaaggctcctccagatgcccaagcaagctccgatgggatcgagtttactcaaccg
cgacgcctcaacctcggtgaatttccattcgcgctgacagtagccatgaaccaaaagtcc
ttgatcgcggatcccacagccgaggaggaagccattttagacactaagatgatcgtgatc
ctcaactcttcccagaaaatcatcgctctccacaaggctggtggatcgaccactgcttct
acagcaacaatccaggattgtcttgcgctcgcgatgagaagaagaaaaacactgcaaaaa
gttttggaagaggctctccgaaagagcaccaaatag |