Selaginella moellendorffii: SELMODRAFT_177006
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Entry
SELMODRAFT_177006 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K22991
WD repeat-containing protein 45
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_177006
Membrane trafficking [BR:
smo04131
]
Autophagy
Other autophagy associated proteins
Others
SELMODRAFT_177006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_Vps41
WDR55
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_EML
RMC1_N
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
9653731
NCBI-ProteinID:
XP_002978578
JGI:
177006
UniProt:
D8S5A0
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MPPAQVAAAGVAVEHTDSSDPSAGTAAQDQASAPKLLISAAFNQDYGCFACGTNTGFRIY
NCDPFKETFRREVPNAGIALVEMLFRCNILAIVGGGPIPRYPPTKVMIWDDHQGRCIGEL
AFRSEVRGVKLRRDRIVVILEHKIYVYNFVDLKLLHQIETIANGKGLCALSPSSTTPILA
CPGLHKGQVRVEHYGLRKTKFIPAHDSNLACFSLSQDGKLLATASTKGTLIRIFNTMDGT
RLQELRRGADRAQIFSIAFSPNAQWLAVSSDKGTVHVFRLKGPSPSDESRPAEAQSIERS
GSQGSGCTSPFAGSPTLSPGGNPGSTLSFMKGVLPKYFSSEWSFAQYRLPEEIHATVAFG
AQKNSVLIVGLDGSFYKCTFDSANGGEMMQQEYTKFMRTNEADQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggcgcaggtagcagcagcaggagtagcagtagagcacacggattcttccgac
cctagcgccggcactgccgctcaagatcaggcaagtgcccccaagcttctcatctcggcc
gcattcaaccaggactatggttgtttcgcgtgcggcacaaacacaggcttccggatctac
aattgcgatcccttcaaggagacgttccggcgagaggtaccaaacgcagggattgcgctc
gtagagatgctctttaggtgcaatatcctcgcgatcgtgggcggtgggccgatccctcgc
taccctccgaccaaagtcatgatctgggacgatcaccagggccgctgcattggggagctt
gcattcaggtccgaggttagaggggtgaagctccgcagggacaggatagtcgtgatcctg
gagcacaagatctacgtttacaatttcgtggacttgaagctacttcaccagattgagacg
atcgccaacggcaagggactgtgtgcattgtccccgagctccacgacgccgattcttgct
tgtccgggactccacaaagggcaggttcgtgtggaacactacggactaagaaaaaccaag
ttcatcccggcgcacgattccaatctggcttgcttcagtctctcgcaggatgggaagctc
cttgctactgccagcaccaaggggacgctcatccggatctttaacactatggatggaact
cgtctccaagagctgcggaggggagcagatagagcacagattttcagcattgccttctcg
cccaacgctcaatggcttgccgtttccagtgacaagggtaccgtgcatgttttcagactt
aagggtccgtcgccttctgacgagtcgaggccggctgaagctcaaagcatcgagaggagt
gggagtcagggatcggggtgtacaagcccgtttgccggctcgccaacgctctctcccggt
ggaaatcctggctcaactctttcgtttatgaaaggtgttctaccaaagtacttcagctcg
gaatggtcgtttgcgcagtacaggctcccagaagagattcatgccactgtcgcgtttgga
gcacagaagaactcggtcctcattgtgggactagacggcagcttctacaaatgtaccttc
gattcagcaaatggcggagagatgatgcaacaagagtacaccaaattcatgcgaacaaac
gaagccgatcaatga
DBGET
integrated database retrieval system