Selaginella moellendorffii: SELMODRAFT_178258
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Entry
SELMODRAFT_178258 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_178258
Spliceosome [BR:
smo03041
]
Common components
Common spliceosomal components
General mRNP proteins
SELMODRAFT_178258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
DUF1866
Motif
Other DBs
NCBI-GeneID:
9656286
NCBI-ProteinID:
XP_002980666
JGI:
178258
UniProt:
D8S0D1
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MDFDEYEYLEKTVESAAAAGATAGANGEGAKAVAAAEDDGHKSEHRSSKRSRGDEERDRD
KGDREKRSRREHRSSRYEREKDRDRGRGDDKEKSERDRDRDRDKERSRSRRDDRDKDSRR
HSRDKEKEERASSKDREKDKDFRKSRERRDRKEESAPAESEPDPERDQRTVFAWQICLKA
DEKHVYDFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPLALQLNNQPLLGQNVM
VKPSEAEKNLVHSASGGSAAGAFNGPYSGGARRLYVGNLHVNITEDQLRQVFEPFGVIEL
VQLPLDQETGLCKGYGFVQYSKLEDARAAQQGLNGILELAGRAIKVSAVTDQQTGQDIGT
TQNDLDDDEGGGLALNARSRALLMQKLDRSGGVGAPASLQPQAPMAVPPVYGGIGSALSM
QNGSVLPEEPIGPPSECLLLKNMFDPATETDPEFDIDIKNDVQDECSKFGPVKHISVDKY
SQGHVYVRFGTAIDALAAQLNLNKRWFAGKTIRATFMNVQVYEEKFPESKQL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtacctggagaagacggttgagagcgccgctgccgccggt
gctacagccggggcgaatggcgagggcgccaaggcggtggcggcggcggaggacgatggg
cacaagagcgaacaccgcagtagcaagcgctcgcggggggacgaggagcgcgatagggat
aagggcgatcgagagaagcgctcgcgccgggaacacaggagctccaggtatgagcgggag
aaggatagagatcgagggcgcggcgacgacaaggagaaatccgagagggatagggaccgg
gatagggacaaggaaaggtctcggagtagaagggatgacagggataaagactcgcgacgc
cacagccgagataaagagaaggaggagagggcaagctccaaggacagggagaaagataag
gactttcggaagtctcgagagaggcgagacaggaaagaagaatcagcaccagcggagtct
gagcctgatccggaaagagatcagcgaacagtctttgcttggcagatttgtctcaaagcg
gacgagaagcacgtctacgattttttctccaaagccggaaaggtccgggatgtgcgtctc
atcatggatcggaattctcgaagatctaagggtgttgggtatatcgagttctacgatgcc
atgtctgttccgctggccctccaattaaacaaccagccgctgcttggtcaaaatgtgatg
gtaaaaccgtccgaagctgaaaagaatttggttcactcagctagtggtggatcagccgcg
ggagctttcaatggcccttattccggtggtgctcggcgtttgtacgttggaaatctacat
gtgaatatcactgaggaccagctccggcaggttttcgagcctttcggcgtcatcgagctt
gttcaactcccgctggaccaagaaacagggctttgtaaagggtacggctttgtgcagtat
agcaaacttgaggatgcgcgagctgctcaacaaggactgaatggaattttggagcttgct
ggacgagccatcaaggtatctgctgttaccgatcaacaaactggacaagacatcggcact
acgcaaaatgatcttgatgacgatgagggaggtggattggctttgaatgctcggtccagg
gctctacttatgcaaaagcttgaccgcagtggtggtgttggggcgcccgcttctcttcag
cctcaggcccccatggctgtaccacccgtatacggtggtataggttctgcattgtcgatg
caaaatggatcggtgcttccggaggagccaataggaccacctagcgaatgcttacttttg
aagaacatgtttgatccagccacagagactgatccagagtttgatatcgatattaaaaac
gacgtgcaggatgaatgctcaaagtttggtcccgtgaaacatataagcgtcgacaagtac
agtcaagggcacgtctacgtaagattcggtacagcaatcgatgctttggccgcgcagcta
aacttgaacaaacgatggttcgctggaaaaacgattcgggcgacattcatgaatgtgcaa
gtctacgaagagaagttcccggagagcaagcagctctag
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