Selaginella moellendorffii: SELMODRAFT_178863
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Entry
SELMODRAFT_178863 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_178863
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELMODRAFT_178863
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SELMODRAFT_178863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
IstB_IS21
T2SSE
AAA_19
TIP49
DUF4600
Motif
Other DBs
NCBI-GeneID:
9647400
NCBI-ProteinID:
XP_002981317
JGI:
178863
UniProt:
D8SDF9
LinkDB
All DBs
Position
Unknown
AA seq
1914 aa
AA seq
DB search
MRILERLRQHYPSAAKEGEADGVEFGSDLDFRAPCKEEKRVETIFTKPREDPPAIVNLRW
VQDICKESGDELAFAVCRVLESSDSGDQIAGYLFDLMGDNGFEHIQVLLQCRKELVEAFH
KGLSRLKLENPSQSNQGRVPSYGTQVSVQTSLDRQIDKLRRKEEKRHGKRGEESELDWTG
GFSAVVDASERPDEGIEGLVGKGDGFTGMTGASLPPGSVKKVFKGYEEVQVPPTPTSSLK
PGEFLVKISELDDISQAAFQGYQTLNRIQSRIFPTAYNSNENILVCAPTGAGKTNIAMIT
VLHEIRKHFKFGVLQKSEFKIVYIAPMKALAAEVTAAFGRRLAPLNVVVKELTGDMQLTK
RELEETQMIVTTPEKWDVITRKTSDMALATLVKLLIIDEVHLLNDDRGAVIEALVARTLR
QVESSQSMIRIVGLSATLPNYIEVAKFLRVSPETGLFYFDASYRPVPLMQNYVGVTEPNF
ALRNSIMNEVCYGKILEAVRHDQQAMVFVHSRKDTVKTARILVDIAQRNGEIGLFLNMDH
PQYGIMKREASNSKSKELWELFQSGFGVHHAGMLRSQRNLAERFFSEGLLKILVCTATLA
WGVNLPAHTVIIKGTQLYDPKAGGWRELGILDVMQIFGRAGRPQFDSSGEGIIITTHDKL
AHYLRLMTHQLPIESQFVSALKDNLNAEVVLGTVTNVREASTWLSYTYLFVRMTASPLAY
GLEWNEAMNDPQLVAKRNALIVDAARALNKAKMLRFDEKSGNFYVTDLGRVASHFYLQYR
SVETYNEMLKQHMSDSELFKLVSHSSEFENIMVREEEQQEIAKLLHTSCPLEAYGGAESK
YGKINVLIQVYISQGYLDGFSLIVDSAYISASLGRIMRALFEICLRRGWCSMSAMILEYC
KAVDHRIWPHQHPLRQFHGVLSPEVLRKLEDRGADLDKLYDMNEKEIGSLISSPYGGKLV
RQCMDHFPFINLSANVSPITRTVLQVTLTITADFTWKDRFHGTALRWWIWVEDSDNEHIY
HSEHWTLTKKMVAEGSQTISFTIPIFEPIPSQYYIRTISDTWLQASYLYTLSFQHLILPE
LHPPHTELLNLRPLPVSALKNQKYEERYKFSHFNPIQTQAFHTLYQTDHNVLLGAPTGSG
KTISSELAMLRLFNTQPDMKVIYIAPLKALVRERVDDWKKSLVPTLGKKLVELTGDFTPD
LLALLEADIIISTPEKWDGISRSWHNRSYVTKVGLMIIDEIHLLGADRGPILEVVIVSRM
RYISSQTARHVRFVGLSTALANAKDLGDWLGIENVGLYNFKPSVRPVPLEVHIQGYPGKF
YCPRMNSMNKPTYAAIRTHSPLKPVLIFVSSRRQTRLTAFDLIQFAAQDEQPRQFLQMNE
EDNSMILYKVVDSSLKHTLQFGIGLHHAGLCDSDRTLVEELFYNNKIQVLVCTSTLAWGI
NLPAHLVVIKGTEYFDGKSKRYIDYPITDVLQMMGRAGRPQFDQHGKAVILVHEPKKSFY
KKFLYEPFPVESSLVHHLHNHLNAEIAAGTIATKQDALYYLTWTYLYRRLVMNPSYYGLE
DTAAESVNHFLSSLVNGTLEALDDAGCIKVSEDNVEIQMPGLIASKYYLHYTTVALFSSN
VHSESSLEELLQLLSSAAEYDELPVRHNEENLNAILAQQARMRVDNKLLDDPHVKANLLF
QAHFSRLELPISDYVTDTKSVLDQSIRILQAMVDAAANGGWLRTTIRAMQLLQMIMQGTW
SDHSPLLMLPNTTTELLPSLPFATLDEFLSLPSQRLRKLFERFMSQSQVHEVIQAWNFLP
RIDLTWRMRDQRLSEGDKFTSFAIDIEVKSNNTRRSSTRAFLPRYSKSKEEGWWIVVGST
STWELFAMRRVSIKDKRLSTSVAVPRVPAGTQEIALFLVSDCYVGLDQTHTIPV
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgaggattttggagcggttgcggcagcactatccgtcggctgccaaggaaggagaggcg
gacggcgttgagtttggaagcgatttggattttcgggcgccgtgcaaggaggagaagcga
gttgagacgatattcacgaagccaagggaagatcctccggccattgtgaatcttcgatgg
gtgcaagacatatgcaaagagtctggggacgagctagcctttgcagtgtgtcgcgttctg
gagtcatcggactctggagatcagattgccggctacttgtttgatcttatgggggataac
ggatttgagcacatccaagttttgctccagtgcaggaaagagctcgtggaagcgtttcac
aagggtctgtctcgtttgaaattggaaaatccttctcaatcaaaccaaggacgtgtaccg
agctatggcactcaggttagtgtacagactagtttagatcgccagatcgataaactgcga
cgaaaagaggaaaagagacatggaaaacgtggggaagaatcggagctcgactggactggt
ggattttctgccgtagttgatgctagcgagaggcctgatgaagggatagaaggtctagtt
gggaaaggtgatggtttcactggcatgaccggggcatcccttccaccgggttctgtgaaa
aaggttttcaaaggctacgaagaggtgcaagtaccacccacaccaacatcgtcgttgaag
cctggagaattcctggttaaaatttccgagcttgatgacatatcacaggcagctttccaa
gggtaccagaccctcaatcgcattcaaagccggatctttccaacagcgtataacagcaac
gaaaacatattggtctgtgcaccgacaggagccggaaaaactaacattgccatgatcacg
gttctacatgagataaggaaacactttaagtttggagttctacaaaaaagcgagttcaag
atcgtctacattgctccaatgaaggcacttgcagcggaagtaacagcagcatttggtcga
aggcttgcaccactgaatgttgttgtcaaggagcttacaggtgacatgcagctcaccaag
agagagcttgaagagacgcagatgatcgtaaccacaccggagaagtgggatgtgatcaca
cgaaaaaccagtgatatggctctcgcgactcttgtgaagttgcttattattgacgaggtg
catcttctaaacgatgatcgtggagccgtcattgaagcacttgttgcgagaacattgaga
caggtcgaatcaagtcaaagcatgatcaggattgttggcctctcagcaactctaccaaac
tatatagaggtggctaagtttttgagggtgagtcccgaaaccgggttgttctactttgat
gcaagttatcgtccagtgcctctgatgcaaaactacgtgggcgtcactgaaccaaacttt
gcgctacgcaatagtattatgaatgaagtgtgctacggaaagatattggaggcggttcgt
cacgatcagcaagcaatggtctttgtgcattctcggaaagataccgtgaaaactgctcgt
atactggttgatatagcacaaagaaatggcgagataggccttttcttgaatatggatcat
cctcagtatggaataatgaagagagaagcttcgaactcaaagagcaaggagctttgggaa
ctcttccagtccgggtttggagttcatcacgctgggatgctacgctctcagagaaacttg
gcagaacgttttttttcagaagggctcttgaagattttggtttgtactgcaacattggcc
tggggtgtaaatctaccagctcataccgtcattatcaagggtactcaactatacgatcca
aaagctggtggttggcgagaactcggcattcttgatgtcatgcagatttttggacgcgca
gggcgtccgcagtttgattcaagtggagaaggaattattattactacccatgacaagctt
gcacattatttgcgattgatgacgcaccaattacccattgagagccaatttgtaagcgct
ttgaaagataacttgaacgcggaagtggttcttggaactgttactaacgttcgtgaagcg
tcaacttggctcagctacacatatttgttcgtgcgaatgacggccagcccgctagcttat
ggattggaatggaatgaggccatgaatgatcctcaacttgttgcgaaacgaaatgctcta
attgtagatgctgctcgtgcgctgaataaggcaaaaatgttacgttttgatgaaaaaagt
ggcaacttctatgtcacggacttgggccgtgttgcaagccatttttatcttcaatacagg
agtgtggaaacttacaacgagatgcttaagcagcatatgagtgatagcgagctttttaag
ctggtctcgcattcatctgaatttgaaaacattatggtgagggaagaagagcaacaagaa
atagctaagcttctccatacctcttgccctttggaagcttatggtggggctgagagcaaa
tatggaaaaatcaacgttcttatacaagtctatatatctcaaggttacttggatgggttt
tctcttattgttgatagtgcctacataagtgcaagcttgggacgcattatgagagcgttg
tttgaaatttgcttgcggcgtggctggtgttcaatgtcggcaatgattctagaatattgc
aaggctgtagaccaccgtatttggcctcatcagcatcctttgcgacaatttcacggagtc
ctttcccccgaggtgctgcgtaaactggaagaccgcggtgctgacttggataaactttat
gacatgaatgaaaaagagattggctctttgatcagcagtccctatgggggaaagctggta
cgtcaatgtatggatcacttcccgttcatcaatctgtctgcaaacgtgagtccaattacg
cggactgttcttcaggtcaccttaactattaccgcggattttacttggaaggacaggttt
catgggacggctttaagatggtggatttgggtggaggattcggataacgagcatatttac
cactcggagcactggacattgaccaagaaaatggtggcggaaggaagccagacaatttca
ttcaccattcccatttttgagccaattccctcgcagtattacattcgtaccatttcggac
acgtggttacaagcgtcctacctatatacactctcttttcagcatcttatcttaccagag
ctccaccctccacacaccgagctactaaaccttcgaccattgccggtgtcagccttgaaa
aaccagaaatatgaagaacgatacaagttttcacatttcaatcctatccaaacgcaggct
tttcacactttgtaccaaactgatcataatgttctgctgggcgctccaactgggagtgga
aaaacaatatcctcagagcttgccatgcttcgcctttttaacacacaaccagatatgaag
gtcatatacattgctcctttaaaggctcttgtacgggaaagagttgacgactggaagaaa
agtctggtacccacgcttggaaagaagctggtggaattaacgggcgattttactccggat
ttacttgcgttgcttgaagcagatatcatcatttcaactcctgaaaaatgggacggtatt
agtcgtagttggcacaacagaagctacgttacaaaggtcggcctgatgatcattgacgaa
atacatttgctaggcgcagacagaggtccgatccttgaggtagttatagtatcccggatg
cgctatatttcttctcaaaccgctcgtcatgttcgatttgttggcctgtcaacggccctt
gcgaatgcaaaggatttgggagactggctgggcattgaaaatgttggactgtataatttc
aagccaagcgttcgcccagtaccactagaagttcatatacagggatatcctgggaagttt
tactgccctcgaatgaatagcatgaacaaaccaacttacgctgctatcagaacacactcg
cctttgaagccggttttgatatttgtctcttctcgtcgtcaaactcgacttactgccttc
gatctcattcagttcgcagcccaagacgaacagccacgccagtttttgcaaatgaatgaa
gaggacaacagcatgattctgtacaaggttgtggatagtagtctaaagcacacattgcag
tttgggatcgggttgcaccatgctggtctctgtgacagtgacagaactctagttgaggag
ctcttttacaacaacaaaattcaggttttagtttgcacgagcactttagcttggggaatc
aatctcccagcacatctagttgtaatcaaggggaccgagtattttgatggaaagtctaaa
cgctacattgattatcctatcacggatgtattgcaaatgatgggccgggcaggacggccc
cagttcgatcaacacggaaaggctgtaatattggttcatgaaccgaagaaaagcttctac
aagaagtttttatatgaaccttttccagttgaaagcagcttggttcaccaccttcataat
cacttgaacgcagagatagctgctggaacaattgcaacaaagcaagatgctctttactat
ttgacatggacgtatctgtaccggcggctggttatgaatccaagctactacggtttggaa
gacacagcagctgagtccgtcaatcatttcttgtcaagtcttgtaaatggcacacttgaa
gcactagatgacgctgggtgcatcaaagtgagcgaagacaacgtagagatacagatgccg
ggactcattgcttcaaaatactatcttcactacacaacagtagcacttttcagctcaaac
gtacactctgagagttcattggaggagctattacagctgctttcatctgctgcggagtat
gacgagcttcctgtccggcataacgaggaaaacctgaatgcgattcttgcgcagcaagca
cgaatgcgtgtggacaataagctgctagatgaccctcatgtgaaggccaacttgctgttt
caggctcatttctcacgactggagctgccaatttctgactacgtgacagacacgaagtca
gtgctggaccaaagcatacgtatacttcaagcgatggtggatgctgcggccaatggagga
tggctgagaacgaccattcgggctatgcaactcttgcagatgattatgcagggaacatgg
tctgatcattcgcctttgctcatgctgccaaacacaaccacggagctcttgccttcgctg
ccattcgctacgttggacgagttcctgtccttgccgtcacaacgcttgcgcaagctgttc
gagcgctttatgtctcagtcccaagttcacgaagtcatacaggcatggaattttcttcca
cgaatcgatcttacgtggaggatgcgagatcaaaggctgagtgagggggacaagttcacg
tcgttcgcaatagacatcgaagtcaagtccaacaacacaaggagaagcagcactcgagct
ttcctgcctcgatactcgaaatccaaggaagagggatggtggatcgttgtaggaagcaca
agtacttgggagctcttcgccatgaggcgcgtgagcatcaaagacaagcgtctcagcaca
agcgttgcagtgccaagagttcctgcgggaacacaggagatagcgctgttcctcgtctca
gattgctacgttggcctcgatcaaactcataccatcccggtttag
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integrated database retrieval system
