Selaginella moellendorffii: SELMODRAFT_179234
Help
Entry
SELMODRAFT_179234 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06699
proteasome activator subunit 4
Organism
smo
Selaginella moellendorffii
Pathway
smo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
SELMODRAFT_179234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smo03051
]
SELMODRAFT_179234
Proteasome [BR:
smo03051
]
Eukaryotic proteasome
Regulatory particles
PA200
SELMODRAFT_179234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_PSME4_mid
PSME4_C
HEAT_PSME4
Motif
Other DBs
NCBI-GeneID:
9634836
NCBI-ProteinID:
XP_002981990
JGI:
179234
UniProt:
D8SF26
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MAKECPDDAAAPPKTSLYNRWLPAIVAERIGEEEGRFHQLALKLKEEWEPGNSASAVRTT
RFIYLIQSFLKALSTVAVEDVQLVANIGLEVLLEGTINLQAQTRWAICLTRIFRKYRKKL
SLSLDWRPFYKIFVNTHFKRQEFYSGLGTNSEHATNFVVLLKCCRYYFSAGSATEIWNEF
RPCFDHPCRTSCLEALGFLGLFIPLKSQHSLSEPYVFTVDWVAECLDLWQRIPSCQFWSS
QWGSLIGRCITSLDMNWEPFMPVIFSHLLNSFRVPVGRSSAHPPINWSIHSFPPGINVSL
SKTAAKSIVRTSSSFRKLVDYLEPYYHPSNGGHWSDSLEHFMTFLVRCFSKRMERECNTQ
KKTRQVLGAVERASFVKEVLRLVERGQYSKSDRLSHACAKAVSNLAYIEPALALNVAVSS
FETAMVSITATHQLELAIKTLALCTRPILLFYQRETASNKENQLTAGPAVRYRDALLGSM
FKTIPGLDANDPLKTLATMQLYCSVLSSVSNLQDPDHNGIFPIDWEKWTFQFLDQLFSLL
LSLEPGSQSSLSTETNTNDGFLVESGSYFYPLLALLFGKLPERIFKLVLVRIKKFLTGNI
LPGAADEMATLCFAAVERDSSTAISMLLEPIMKDLLSTLGETPSTGYCKNGETSDFSSKA
TLSSALEQRATYQLNVLASTIAAGDATILNYKTILKDLIQVAFNAPSCKVNDAGKLLLKF
LIRRLVCYFPVSSWKICVSRLPASDELDIWIGTKDKNEFDSARPSWHIPSADEIMFVEEL
VDFHMHGALSNLQRFPEKGLQKNTGQEKDYLRVTLLRVDAVLQGLGSSLPDFQKVEHSYT
VVGLSGVPIGDSSLRSDIAMILHKACGYLLANKGDESAILKPLISVMNAIVNSGGVENGY
WHQARNDWDAERLNLTEPAANFLTSNDTKCLRRPLWLVHQRAYIQHVWRSAETEYYDYYM
SPTNSLPPALESLSNDLVSISLHRYKAIRSYAAAVLGLLMHRFFFLPQTILPLLVTHLNN
PNATEESTLGACAILKTRTVIRSMMEVRLTSIVICLCVNVFAHHDSTKAQNAINKLFIAF
NWYFGGSPVQVTPNIEDTIMDIKSFATGASSSVHWRYNLMAQGLLLFLTLAPFFESGKKN
LNLVRNGYEHFLGKLTSDLPTVRRLSVRAVLLLLGAESDKMQGHELNGSITIGQQLLSES
FGERVVELLALDHHYTEDDGIHVPQSMSDVGLVYLLPTYMCDWPLTRSWESKSLGVAFSK
ASAKLFEELTRKYGQIVLDILRRPLEDAVSTVDERGKQCAAAEIIGGVIRSEAACVEAAW
DDWLSALLRKALKKTTLECAPEWVACIRYATSGSQGSALRFKVLECLGKLLGSHASSSLA
AKRFNFLTAALLEVQSKDMLSDEVSFQVMLLDEILEYTGHSTAQVRKAIGTLACVLSAGL
RECGHEVPLDGSTSLGRFIQRTEPEARKILNVHENVEGDVSKRDKKAVKDMETVSDIDLS
ASFFTPLVVQVFYFLLACMYSGRFNILSDLVVELVHPLLLLQDTSEKDLTHLARSALRYL
KWQLFPTSHLAELASRLLKAASEDNWRVRVASISFLQPFMYRHSFLLNHSLWQLLWNKVT
ESLCDPQLEVGVREMSSTAAAGMMRGAESSVVQSFREQALATTRSILKSGKPKLPDGLAV
PVVHGAVLALTACILSVPYDIPRYSSQETLTRCDLYRISWLPEMVTTITYFSHYPWPIRA
TVTKAIGEFRRTHSDTWEIQKEQFTEEQLEVVCFTFLLLL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggagtgccccgatgatgctgcggcgccgccgaagaccagtctctacaatcgc
tggctccctgcgatcgttgccgagaggattggagaagaggagggacgattccatcagctg
gcgctaaagctcaaggaagaatgggaacctggtaattcggcctcggctgtcaggactacc
aggtttatctatctcatacaatcgttcttgaaagcactgagcactgtggccgtggaagac
gtgcagcttgtagcgaatatcggactggaggttttgctcgagggcaccatcaatctccaa
gctcagacaaggtgggcgatctgcttgacaaggatctttagaaagtaccgcaagaagctg
agcttatcgctggactggcggcctttctacaaaatattcgtaaacacgcatttcaagagg
caggagttttacagcggactcgggactaactcggagcatgcaaccaactttgtcgtgctt
ctcaagtgctgccgatactacttctctgcgggttctgccacggaaatctggaacgagttt
aggccttgcttcgatcatccttgtcgcacatcgtgcttggaggctctaggctttctgggg
ctttttattccactgaaatcacagcattctttgtcggagccttacgttttcacagttgac
tgggtggccgagtgcctcgacctctggcaacgtattcctagctgtcagttttggagctca
caatggggatccttgattggccggtgtatcacgtcgttggatatgaactgggaacctttt
atgccagttatattctctcatctactgaactctttccgggtacctgttggacggtctagt
gcacatcccccaattaactggtccatccatagttttcctcccggaataaacgtgtcgtta
tcaaagaccgcggccaaatcaatcgtaagaacttcgtcttctttcaggaagctggttgat
tatcttgagccatattaccacccgtcaaatggtggccactggtctgactccctcgaacat
ttcatgactttcctcgtacgttgcttctcgaagcgtatggagagagagtgtaacacgcag
aagaagacgagacaagtcttgggggcagttgaacgagcgtcttttgtgaaggaagtttta
aggctggtagagagaggccaatacagtaaaagtgacaggctttctcacgcttgcgctaaa
gcagtgtcaaacttggcttatattgaaccagcattggcgctgaacgttgcggtttcttct
ttcgaaactgccatggtgtcgataacggcaactcatcagcttgaattagcgattaaaact
cttgccttgtgtaccaggcccattctactcttttatcaaagagagacggcctctaacaag
gagaaccagttaactgctgggcctgctgtgcgctatagagatgcgcttctcggttctatg
ttcaaaactatacctggattggatgcaaacgatcctcttaaaactcttgccaccatgcag
ctgtattgctccgtgttatcgagcgtgagcaaccttcaagatcctgatcacaacggtatt
tttcctatcgactgggaaaagtggacatttcagttcctggaccagctattttctctgctt
ctgagtctggaaccagggtctcaatcttctttgtccacagaaaccaataccaatgacggc
tttctcgtggagagtgggtcctatttctatccgctattggctcttttgtttggcaagctg
cccgaacgtatcttcaaactggttctcgtgcgtataaaaaagttcttaactggcaatatc
ttacctggagctgcggatgaaatggcaactttgtgttttgctgctgttgaacgtgattct
tctacggccatcagcatgttattagagcctatcatgaaggatttgctatccacgttgggt
gaaacaccgtctacaggatattgcaaaaacggagaaacgtctgactttagctctaaggcg
actctctcatcggctctagagcaaagagcaacgtaccagcttaacgtcctggcatctaca
attgcagccggagatgcaacaattctgaattacaagacgatcctcaaggacctcattcaa
gtagcattcaatgctccatcctgcaaggttaatgatgctggaaaactgttgctgaagttt
ctcattcgaaggctagtgtgctattttcctgtcagctcttggaaaatatgcgtttccagg
ttgccagcatctgatgaactagatatctggattggtacaaaagacaagaacgagtttgac
agtgctaggccatcttggcacattccttccgccgatgaaattatgttcgtggaggagctg
gttgacttccacatgcatggggcgctctctaatcttcagcgctttcctgaaaaaggtctc
cagaaaaatacaggacaggagaaggactacctccgtgtgacacttctacgtgtggacgct
gtactccaaggtttgggatcttcacttcctgactttcagaaggttgagcacagctatacc
gtcgttggattgtctggggtgccaattggagactccagtttgagaagtgacattgcaatg
atccttcacaaagcatgcggctaccttctagcaaacaagggggacgaatccgcgatactt
aagcctctaatctctgtcatgaacgctatagtcaattccggaggcgttgaaaacggctac
tggcatcaggcccgaaatgattgggatgccgaacgactgaatttaaccgagcctgctgcg
aatttcttaacaagcaacgatacgaaatgtttgagaagaccgttgtggttagtacaccag
cgtgcatatattcaacatgtttggcggagcgcagagacagaatactatgattattacatg
agtccgacaaattccttgcctccagctcttgaatcacttagtaacgatctggtaagcatt
agcttacatcgttacaaggcaataagatcgtatgcagccgctgtccttggacttctgatg
caccgattttttttcttgccacaaacaatactaccactgctcgttacgcaccttaataat
cccaacgccactgaagaatcgacactaggtgcctgtgcaatactaaaaacgagaacagtt
atacggtctatgatggaggtgcgcctaacaagcatagttatttgcctttgtgttaatgtt
ttcgctcatcatgattccacaaaagcgcagaacgctattaacaagcttttcattgccttc
aattggtattttggtgggtctcctgtccaagtaacaccaaatattgaggacacaataatg
gatatcaaaagcttcgctaccggtgcttcatcatccgtccattggcggtataatctcatg
gctcaaggattgctgttgtttctaacactggccccgttctttgaatctggaaagaaaaat
ttgaatttagtcagaaatggatacgaacatttcctcggaaaacttactagtgatttgccg
acagtgcgaaggctgtcagtgagagccgtgctactactgttaggtgctgaatccgacaag
atgcaggggcatgaactaaatggatcaatcaccattgggcagcaattgctaagtgagagc
tttggcgaacgtgttgtcgagctgctggcacttgaccaccattacactgaagacgatggc
atccacgttccgcaaagcatgtccgacgtcggcctggtttacttgctaccgacgtacatg
tgcgactggcctttaacgaggagttgggagtcgaagtcactgggagttgcattctcgaaa
gcttccgctaagctgtttgaagagctcactcggaaatatggccagattgtcttggacatc
ttacgacggccgctggaagacgctgtctcgaccgtggatgaacgtgggaagcagtgtgct
gcggctgagataatcgggggtgtgatacggtcggaggctgcctgcgttgaggcggcatgg
gatgactggctatcagctttgttgcgtaaggccctcaagaaaaccacactggaatgcgct
cctgaatgggtggcatgcattcgatacgcgacgagtgggagccaagggtcggcgctgcgt
tttaaagtgctggagtgccttggcaagttactgggatcgcatgcttcttcgagtctcgcc
gctaagcggtttaattttctcaccgcggcactattggaagtccagagcaaagacatgctt
agcgacgaagtcagcttccaggtcatgcttctcgacgagatattggagtacactggtcac
tcaactgctcaggtccggaaggcgatcgggacgcttgcttgtgttttaagtgctggccta
cgagagtgtggtcacgaagttccactcgatggcagcacatctctcgggaggttcattcag
cggaccgaaccagaagcaaggaagatcctgaatgtgcacgagaacgttgaaggtgatgtt
tcgaaacgtgacaaaaaggctgtcaaggacatggagacggtaagtgatattgatctttcg
gctagcttctttacacctctggtcgtgcaggtattttattttctgttagcttgtatgtac
tcaggacggttcaacattttgtcagaccttgtagttgaacttgtacatccacttcttttg
ctccaggatacctcggaaaaagacctgacacacttagcacggtcggctctgcgttacctg
aagtggcagctctttcccacctcgcaccttgccgaacttgcgtcgcgattactcaaagct
gcgagtgaggataactggcgcgttcgagttgcctccatttcgttccttcagccatttatg
tacagacattcattcttattgaatcatagcctttggcagttgctttggaacaaagtgacc
gaatctctatgtgaccctcagctggaggtaggagtgagagagatgtcgtcgacggctgca
gcgggcatgatgagaggcgcagagagcagcgtggtgcaaagctttcgcgagcaggcactg
gcgacaacacgctcaatcttaaaatccgggaagccaaagcttccggatgggcttgcagtt
cccgtggtgcacggcgcagtgcttgctctcacagcatgcattctctccgttccttacgat
atacccaggtactcgtcacaagaaactctgacccgttgtgatctttaccgtatcagctgg
ctgcccgagatggtgacgacaataacatacttcagccattacccgtggccgatacgagcg
accgtaaccaaggcgattggcgagttccgtcgtacgcactcggatacttgggagattcag
aaggaacagttcacggaagagcagctcgaggtagtgtgttttacttttcttttgttgctt
tga
DBGET
integrated database retrieval system
