Selaginella moellendorffii: SELMODRAFT_180307
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Entry
SELMODRAFT_180307 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_180307
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SELMODRAFT_180307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
zf-C3HC4
zf-C3HC4_3
SNF2-rel_dom
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_4
Baculo_IE-1
ERCC3_RAD25_C
DUF1644
Motif
Other DBs
NCBI-GeneID:
9651170
NCBI-ProteinID:
XP_002983594
JGI:
180307
UniProt:
D8SJR4
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MLRRTKDSTDKEGRPILVLPPAQCEVIECNLSESERDFYDALYHRSKVKFDQFVQEGKVL
HNYASILELLLRLRQACDHPFLVLSRGDTEDYADLGKLARRFLDKNSSLVPSTAYVKEVV
DDIRKGDTAECPICLEMPEDAVLTPCAHQMCRECLFNSWRTSAGGPCPICRRSCTKQELI
TVPTSNRFRVNVEEQWKESSKVEALLQQLETLRESKSVVFSQWTAFLDLLEIPLKRKNVR
FVRLDGTLSQHKREQVLKDFSNIPDVAVMLISLKAGGVGLNLTAASNAFLMDPWWNPAVE
EQAIMRIHRIGQTQNVSIKRFIVKDSVEERMQQVQARKQRLIAGALTDEEVRSARIEELK
MLFR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggagaacaaaagattcaactgacaaagaaggaaggccaattctggtgctccca
ccagctcaatgtgaagttattgaatgcaacctatccgagtctgagcgtgatttttatgat
gccctttaccacagatccaaggtaaaattcgatcagtttgttcaagaaggtaaagttctt
cataactatgcgtcaatactcgaactcctacttcgattacggcaagcttgtgatcatcct
tttcttgttctgagccgtggcgacactgaagactacgcggaccttggaaagttggctaga
cgtttcttggacaagaattcctccctggtcccttcaacggcttatgtgaaagaagtggtt
gatgatattcgtaaaggggacactgctgaatgtccaatttgcttggaaatgccagaggac
gcagttcttacaccatgtgctcaccaaatgtgccgtgagtgcctatttaatagctggcgt
actagcgccggaggtccctgtccgatatgcaggcgttcttgtactaaacaggaacttata
actgtacctacgagtaaccggttccgagtaaatgtcgaggaacagtggaaggagtcatcc
aaagtcgaggcccttctgcagcagctggaaacgttgcgtgagtcgaaaagcgttgttttt
agtcagtggacagcgtttctcgacttgctagagataccattgaaacggaagaacgtccgt
tttgtccgcttggacggaacattgtcgcagcataagcgagaacaagtgctgaaagacttc
agcaatattccagacgtggccgtcatgctcatttctctcaaggcaggaggcgtgggactc
aacctgacggccgcatctaacgcttttctcatggatccttggtggaatcctgccgtggaa
gaacaagccataatgagaatccaccgtatcggccagactcaaaacgtatcgattaagcga
ttcatcgtcaaagactcggtggaggagagaatgcaacaggtccaagcgaggaagcagcga
ttgatcgccggagctcttacagacgaagaggtacgaagcgctcgaatcgaggaactcaag
atgctatttagatga
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integrated database retrieval system