Selaginella moellendorffii: SELMODRAFT_180735
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Entry
SELMODRAFT_180735 CDS
T01496
Symbol
CUL4-2
Name
(RefSeq) ubiquitin-protein ligase, cullin 4
KO
K10609
cullin 4
Organism
smo
Selaginella moellendorffii
Pathway
smo03420
Nucleotide excision repair
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_180735 (CUL4-2)
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_180735 (CUL4-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_180735 (CUL4-2)
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_180735 (CUL4-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_180735 (CUL4-2)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
SELMODRAFT_180735 (CUL4-2)
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
SELMODRAFT_180735 (CUL4-2)
TCR (transcription coupled repair) factors
Cul4-CSA complex
SELMODRAFT_180735 (CUL4-2)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_180735 (CUL4-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
9643885
NCBI-ProteinID:
XP_002984123
JGI:
180735
UniProt:
D8SLC9
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MVVDVKATGHGLSVASPVTAVGLAGGSNSTGTTANLSRKKATPPQPTKKLVIKPFKDKPK
LPANFEDATWDKIRAAVSAIHVKQPVSCSLEQLYQNVEDLCLHKLSGNLYQRLQQECETH
ISAKLNALVGQSPDPVVFLSHVERCWQDHCDQMLMIRSIALYLDRTYVIQNSSVRSLWDM
GLQLFRKHLTSCPEVEHKTVTGILRLIEKERTGETVDRTLLKHLLRMFSALGTYSESFEK
PFIDCTAEFYAAEGTRYMQQTDVPDYLRHVEARLHEENERCLLYLDANTRKHLISTSEKQ
LLERHSPTILDKGFGMLMDANRVADLHRMYLLLARVGALESLKQALSAYIKATGHSIIVD
EEKDKDMVSTLLDFKARLDMIWEESFSKNEPFANTIKEAFEHLINLRQNRPAELIAKFID
GKLRAGNKGTSEEELESMLDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKS
MISKLKTECGSQFTNKLEGMFKDIELSREINESFKQSSQARTKLPAGIEMNVHVLTTGYW
PTYPPMDIRLPHELNVYQDIFKQFYLSKHSGRRLMWQNSLGHCVLKAEFPKGKRELSVSL
FQTVVLMLFNDSLRLSFQDIKDSTGIEDKELRRTLQSLACGKVRILQKQPKGREVEDDDV
FTFNEDFTAPLFRIKVNAIQLKETVEENASTTERVFQDRQYQIDAAIVRIMKTRKVLSHT
LLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggatgtcaaggcgacgggccacgggctgagcgtggccagccccgtcaccgca
gtcggcctcgccggcggaagcaacagcaccgggacaacggccaatctcagccgcaagaag
gcaacgccgccccagccgaccaagaagctggtcatcaagcccttcaaagacaagcccaag
ctgccggccaactttgaagacgctacctgggacaagattagagccgccgtgagcgccatc
cacgtaaagcagcccgtctcttgtagtctcgagcagctctatcagaacgtggaagatctg
tgcttgcacaagctttcgggaaacctgtaccagcgtctgcaacaagaatgtgaaacgcac
atttccgccaagctgaatgctttggtcggccagagccctgatcccgtcgtctttctctcc
catgtggaaagatgctggcaggatcactgcgaccaaatgctcatgataaggagcattgcg
ctctaccttgaccgcacctacgtcatacaaaactccagcgtgcgctcactctgggacatg
ggcttgcagctctttcggaagcatctcacgtcttgtccggaggttgagcacaagacagtt
actgggatactgaggctcattgagaaggaaaggacgggggaaactgttgatcgcacactt
cttaagcatctcttgagaatgtttagtgcgcttggaacatacagtgaaagctttgagaaa
ccatttatcgactgcacggctgagttttacgcggctgaaggaacacgatacatgcaacag
actgatgtgcctgactaccttaggcacgtagaggccaggttgcacgaagagaacgagaga
tgcttgctttatctggacgccaacactcgtaagcacttgatatctacctcagagaagcag
ttgcttgagcgccattctcccaccattttggataagggttttggaatgcttatggacgca
aatcgtgtcgcggaccttcaccgtatgtaccttttacttgccagagtcggtgcactggag
tctctaaagcaagcccttagtgcgtacatcaaggcaactggtcatagcattatcgtggac
gaggagaaggacaaggacatggtttctacgctgctggatttcaaggcccggcttgatatg
atctgggaggaaagcttttcgaagaacgaaccgtttgcaaacacaatcaaagaggcgttt
gagcatcttataaatttgagacagaaccgacctgcggagctcattgctaaatttatagat
gggaagctaagagctgggaacaaaggaacgtctgaagaagaactcgagagtatgcttgac
aaagttttggtccttttcagatacattcaaggtaaggatgtctttgaagcattttacaaa
aaggatctggcaaaacgcttgctattgggcaaaagcgcatctatcgatgctgaaaagtcc
atgatttcgaagctaaaaactgagtgtggtagtcaatttacaaataaactcgaaggaatg
ttcaaggacattgaactttcaagggaaataaacgagtcctttaagcaatcctcacaagcc
aggacaaagctaccagctggaattgagatgaatgtgcatgtgttgaccactgggtattgg
cctacgtacccgcctatggatattcgtcttcctcatgaactcaatgtctatcaggacata
ttcaagcaattttacttgagcaagcacagtggcaggcggctgatgtggcagaattctttg
ggtcattgtgttttgaaagccgagtttcccaagggtaagagggaactatctgtttcacta
tttcagacggtggtacttatgcttttcaacgattcattaaggcttagctttcaagacata
aaggactcaacgggtattgaagacaaagagctccgcaggactctgcagtccttggcttgc
ggcaaggttcgaattttgcaaaagcaacccaaagggagagaggtggaggacgacgacgtg
tttacgttcaatgaggacttcacggctcctttgttccggatcaaggtgaatgcaatacag
ctgaaagagacggttgaagagaatgcaagtaccacagagagagtattccaggatcggcag
tatcagattgatgcggccattgtaagaattatgaagactaggaaggtcctgagccacacg
ttactgataacggagctgttccaacagctcaagttccctataaagccagcggacttgaag
aaacgtatcgagagcctgatcgaccgcgagtacttggagcgagacaagaacaaccctcag
gtatacaattatctcgcatga
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integrated database retrieval system
