Selaginella moellendorffii: SELMODRAFT_181353
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Entry
SELMODRAFT_181353 CDS
T01496
Symbol
PUB13-2
Name
(RefSeq) ubiquitin-protein ligase, PUB13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
SELMODRAFT_181353 (PUB13-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_181353 (PUB13-2)
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_181353 (PUB13-2)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
U-box type E3
SELMODRAFT_181353 (PUB13-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Arm_2
MCAfunc
KAP
zf-Nse
DUF7792
V-ATPase_H_N
MLKL_N
Cnd1
zf-RING_UBOX
HEAT_EZ
V-ATPase_H_C
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
9648962
NCBI-ProteinID:
XP_002984952
JGI:
181353
UniProt:
D8SNN8
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MAGQGEFQELVETLIGLLNEISSLGDYARSHRKECTNLARRLKLLAPLLEEAREASSLDS
LSPFHDLKLVLHSAKDLLSLCHKGSKIFLIMKREGIASSFQSVTADLEHVLDSLPYNSLN
LSEEVREQVELLHAQLKRAKGKAEVIDTELIEDLMRCSMSDERDYDRMAAERLADKLHLK
TWSEIKEEEFRAQESLKLDKGGDLDAAIKMVLGRLKGVAISDADEPYVSIDKARVDFAMR
NPLSPSPRSDKLSNPAIPEDFRCPISLELMKDPVIVATGQTYERSYIQKWLDAGHKTCPI
TQQTLPHLVLTPNYVLRSLICQWCETNGIELPKKVGTSRGGHSSDLEACGDRVAVEALLQ
KLSSPQVDVQRIAVADLRLLAKRSIDNRICIAEAGGVPLLIGLLSSTDTRIQEHAVTALL
NLSIHDPNKAQIVQAGAINPIVEVLKSGSMEARENAAATLFSLSVVDDNKVTIGQTAAIP
ALVNLLREGTPRGKKDAATALFNLSIYQGNKAKAVRAGVVPPLMELLDPNAGMVDEALAI
LAILATHQEGRVAIGQESTIPLLVELIRSGSARNKENAAAVLLALGQNDAAHLVTAQQYD
AGVPLAELVQNGTSRARRKASLILELMHKQQQEQLNKQQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggccggacaaggtgagttccaggagctggtggagactctcattgggctgctcaacgag
atatcatccctgggggactacgccagatcgcaccgcaaggaatgcaccaatctcgcccgc
cgactcaagctcttggccccgctgcttgaggaggcgagggaggccagctcgcttgattcc
cttagccccttccacgacctcaagctcgttctccactcggccaaggacctcctctctctc
tgccacaagggaagcaaaattttcctgatcatgaaaagagaaggaattgccagcagcttc
caatccgtgaccgcggatttggagcatgtgctagattccctgccatacaattcactgaat
ctctcggaagaggtccgagaacaggtggagctcctccatgcgcagctcaagagggccaaa
ggcaaagcagaagttatcgacacggagctgatcgaggacctgatgcgatgcagcatgagt
gacgaacgagactatgatagaatggcagcggagagactagccgacaagctacacctcaaa
acctggtccgagataaaggaggaggagtttcgtgcgcaggagagcctgaagctcgacaaa
ggtggtgaccttgacgctgcaatcaagatggtgctgggaaggctcaagggcgttgccatc
tcggacgcggacgaaccttatgtttcaatcgacaaagcacgagtggacttcgctatgaga
aatcccttgtcaccgtcaccgcgatcagacaagctgagcaacccagccattccagaggat
ttccggtgcccaatctcgctggaactgatgaaagaccccgtcatcgttgcaactggccag
acttacgagcgctcctacatccaaaagtggctagatgccggccacaagacatgcccgata
acgcagcagacgctcccgcatctggtgctgactccaaactatgttctccggagtctcatc
tgtcagtggtgcgaaaccaacgggatcgaactgccaaagaaagttggcacgagtcggggt
ggtcactcgtccgacttggaagcatgtggagacagggtggccgtagaggcgctactgcag
aagctttccagcccccaagtggatgtgcaaaggatagctgtggcggacctcaggctgctg
gcaaagagaagcatcgacaacaggatttgcattgcagaagctggaggtgttccgctgctg
attggactcttgtcatccacggacacgcggatacaagagcatgcagttaccgctctgctc
aatctctccatccacgaccccaacaaggctcagatcgtccaggcaggtgctataaatccg
attgtcgaggttctcaagtcaggcagcatggaggcaagagagaatgccgctgctacgctc
ttcagcctctcggttgtggacgataacaaggtgacgattggccagacggctgcgattcca
gctctagtgaacttgctcagagaaggcactccccgaggcaaaaaggacgcagccactgcc
cttttcaacttgtccatataccaaggcaacaaggccaaggcagtgagagctggcgtggtt
ccgccgctgatggagctgctggatccaaacgcaggcatggtggatgaagctttggctatt
ctggcaatacttgcaacgcaccaggaggggcgcgttgcaatcggccaggagtcaaccatc
ccacttttggtggagctcatacgttccggctcggccaggaacaaggagaatgcagctgct
gttctccttgctctgggccagaacgacgcagctcatcttgtcacagcgcaacagtacgac
gccggggttcctttggcggagctcgtgcaaaacggcaccagcagggccaggcgcaaagcg
agcttgatcctggagctgatgcacaagcaacagcaagaacagttaaacaagcaacaataa
DBGET
integrated database retrieval system
