Selaginella moellendorffii: SELMODRAFT_181612
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Entry
SELMODRAFT_181612 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_181612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_181612
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_181612
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_181612
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SELMODRAFT_181612
Spliceosome [BR:
smo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
SELMODRAFT_181612
Complex B
SELMODRAFT_181612
Complex C
U2 SnRNP specific factors
SELMODRAFT_181612
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
SELMODRAFT_181612
TFTC complex
SELMODRAFT_181612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
9649437
NCBI-ProteinID:
XP_002985318
JGI:
181612
UniProt:
D8SPN7
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MFLYSLTLQRATGIVCACYGNFIGGKSQEIVIGRGKILELLRPDDNGKLQTLLAVEIFGV
VRSLAQFRLTGSHKDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFL
SVDPKGRAVMIAATEKQKLVYVLNRDNAARLTISSPLEAHKSHTVVYSLVGVDCGFENPM
FAAIELDYSDADQDATGQAALEAQKHLTFYELDLGLNHVVRKWSEPIDNGANMLVTVPGG
ADGPSGVLVCADNFVIYKNQSQELRALIPRRADLPADRGVLVVSAATHRQKSVFFFLLQT
EYGDVFKVTLSFNDTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQG
IGDDPDVESSSATLEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEETP
QIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLNA
TLVLSIGETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHIRSLVRINEWKTPGK
KTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPEGRQRS
RFLAVGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQASTGGEDGAVYPASVF
LNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGYI
HQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQTSIQLRYT
PRKFILHPKRKFLVLIETDQGTFTTEEREHMSRSAAAQDNGMMEIDNQEKSEEEPMPDEQ
YGYPKTDSRRWVSCIRVLDPKAAATTCLLELQENEAAFSICCVNFHDNKNLGTVLAVGTA
KDLEWWPKRRSMGGFIHIYRFVEDGRSLELVHKTPIDGVPTALCQFQGRLLAGIGQILRI
YDLGKRKLLRKCENKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSS
PRWLTASLHIDFDTMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKV
EEIIQFHVGEVVTCMQKASLIPGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEMHMR
QEHPPLCGRDHMAFRSAYFPVKDVIDGDLCEQYPTLPPDLQRKIAEELDRTPGEVMKKLE
DIRNRII
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgtacagcctgacgctgcagcgcgccactgggatcgtgtgcgcctgctacggc
aacttcatcggcggcaagagccaggagatcgtcatcggccgcggtaagatcctagagctc
ctgcgccccgacgacaatggcaagctccagacgctgctcgcggtggaaatatttggcgtc
gtccgctcgctcgcgcagttccgcctcaccggatcccacaaggattacctcgtcgtcggc
tccgactcgggcaagatcgtcatcctcgagtacaatcgcgacaggaacgccttcgatccc
gtccacaaggagacgtttgggaaatccgggtgccgccgcatcgtgcccggccagttcttg
tccgtggatccaaagggccgggcggtgatgatcgccgccaccgagaagcagaagctcgtc
tacgtgctcaaccgggacaacgcggccaggctcaccatttcctctcctttggaggctcac
aagtcccacaccgttgtctactccctcgtcggggtggactgtggctttgagaacccgatg
ttcgccgccatcgagctcgactactcggacgccgaccaggacgccacgggccaggcggcg
ctcgaggcacagaagcacctcactttctacgagctggacctgggactgaatcacgtcgtt
cgcaagtggagcgagcccatagacaatggtgccaacatgctcgtcaccgttcccggcggt
gccgatggacccagtggagtcttggtctgcgcggataacttcgtcatctacaagaaccag
tcccaagagctgagagctctgatccccaggcgagccgacttgccggcggacaggggtgtg
ctcgtcgtttcggccgcgacgcacaggcaaaagagcgtctttttctttctcctccagacc
gagtatggggatgtttttaaggtgacgctgagcttcaacgatacggatatggtggtgaca
gagctcaagatcaagtacttcgacacctttcccgtcacctcggcaatgtgcgttctcaag
agcggcttcctctttgctgcttccgagtttggaaaccatgcgctctatcagttccagggt
attggcgacgacccggacgtagaatcctcttctgcaactctcgaggagaccgaagatggt
tttaagcccatctttttccagccccgcaagctcaagaacttgatccagattgacgagggg
gagagcctcatgccaattatggacatgaagattgccaacttgttcgaagaggaaacgccc
cagattttcgtggcttgcgggagaggtcctcgctcgacgctgcggatactcaggccgggt
cttgcagtgtccgagatggcagtgtcacagcttccgggagtaccgagtgctgtgtggacg
gtgaagaagagtgtcaccgacgagttcgatgcctacatcgtggtgtcctttctgaacgcc
acgctggtgctgtccatcggcgaaacagtggaggaagtcagtgacagcggatttctggac
acgacaccttctcttcaagtttctctgctcggggacgactcgctaatgcaggtgtatccc
aatgggatccgacacattcggtcattagtgcgcataaacgagtggaaaactcccggcaag
aagaccatcgtcaaagttggctccaacaggatgcaggtggtgataggcttgagcggcggt
gagctgatttacttcgagatggatccgacggggcagctcatggagatagagaagcgagaa
atgtcgggggatgtggcctgcttggctataggcccagttccagaaggcaggcagcgttct
cggttcctcgctgttggctcctacgacaacaccatccgcatcctctcgctcgaccccaac
gattgcatgcacatcttgagcgtccagatggtggcttccccaccagagtcactgctcttg
ctcgaagttcaggcgtcaacaggtggagaagatggtgcagtgtatccagcgagtgttttc
ctcaacgccggccttcagaacggcgttcttctcaggactgaagttgacatggtcaccggg
cagctatctgggactcgaacgaggtttctgggcctgagagctcccaagctctttgcgacg
tctgttcggggccgtcaggcactcttgtgcctctccagtcggccgtggctcggttacatt
caccagggacacttcctcctgactccactttcttacgagaccctggagtatgcggcctcc
ttctcatcggaccaatgcgcagagggtgttgtggccgtggctggcgaagcgctgcgagtc
ttcacgattgagaggctcggggagactttcaaccagacgtccatccaacttcgatacacg
cccaggaagtttatcctgcatcccaagcggaagtttctggtgctcatcgagaccgaccag
gggacgttcacgaccgaggagcgcgaacacatgagcaggagcgctgcagctcaagacaat
gggatgatggagatcgacaaccaggagaagtccgaggaggagccaatgcccgacgagcag
tatggctatcccaaaaccgactcgaggaggtgggtgtcgtgcatcagagtcctggatccc
aaggcagcggccacaacgtgcctgctggagctgcaggagaacgaggcggcctttagcatc
tgctgcgtcaactttcacgacaacaagaacctcggaacagttcttgctgtgggtactgcc
aaggacttggagtggtggcccaagcggagatcgatgggtggcttcatccacatataccgg
tttgtcgaggacggcagatctctggagctggtgcacaagacacccatcgacggcgttccg
accgctctctgccagttccagggccgtctgcttgccggcatcgggcagatacttcggatc
tacgaccttggcaagcggaagctgctgaggaaatgcgagaacaaaaacttcccgaacacc
atcacctccatccacagttacggcgacaggatctacgtgggcgacatccaagagtccttc
cactacgtcaagtaccggcgagacgaaaaccagctctacgccttcgccgacgatagcagc
cccaggtggctgacagcgtcgctgcacatcgacttcgacaccatggccgcgggagacaag
ttcgggaacctcttcttcgtgcggctgccgcaagacctgtcggaggagatcgaggacgac
ccgacgggtggcaagataaagtgggagcagggccggctcaacggagctcccaacaaggtg
gaggagatcatccagttccacgtcggggaagtggtgacgtgcatgcaaaaggcgtcgctc
atcccaggcgggggcgagagcgtgatctatggcacggtcatgggctctgtgggggcgctg
ctgccattctcgtcgcgagaggacgtggatttcttctcgcacttggagatgcatatgcga
caggagcatccaccgctgtgcggccgcgatcacatggcttttcgctcggcctacttccct
gtcaaggatgttattgatggagatctatgcgaacaatatcccacacttccgccagactta
cagcgcaaaattgccgaggagctggacaggactcccggagaggtgatgaagaagctagag
gacatcaggaaccggatcatctga
DBGET
integrated database retrieval system