KEGG   Selaginella moellendorffii: SELMODRAFT_181612
Entry
SELMODRAFT_181612 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12830  splicing factor 3B subunit 3
Organism
smo  Selaginella moellendorffii
Pathway
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_181612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_181612
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_181612
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_181612
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     SELMODRAFT_181612
Spliceosome [BR:smo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    SELMODRAFT_181612
 Complex B
    SELMODRAFT_181612
 Complex C
   U2 SnRNP specific factors
    SELMODRAFT_181612
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     SELMODRAFT_181612
    TFTC complex
     SELMODRAFT_181612
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Beta-prop_EML_2
Other DBs
NCBI-GeneID: 9649437
NCBI-ProteinID: XP_002985318
JGI: 181612
UniProt: D8SPN7
LinkDB
Position
Unknown
AA seq 1207 aa
MFLYSLTLQRATGIVCACYGNFIGGKSQEIVIGRGKILELLRPDDNGKLQTLLAVEIFGV
VRSLAQFRLTGSHKDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFL
SVDPKGRAVMIAATEKQKLVYVLNRDNAARLTISSPLEAHKSHTVVYSLVGVDCGFENPM
FAAIELDYSDADQDATGQAALEAQKHLTFYELDLGLNHVVRKWSEPIDNGANMLVTVPGG
ADGPSGVLVCADNFVIYKNQSQELRALIPRRADLPADRGVLVVSAATHRQKSVFFFLLQT
EYGDVFKVTLSFNDTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQG
IGDDPDVESSSATLEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEETP
QIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLNA
TLVLSIGETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHIRSLVRINEWKTPGK
KTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPEGRQRS
RFLAVGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQASTGGEDGAVYPASVF
LNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGYI
HQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQTSIQLRYT
PRKFILHPKRKFLVLIETDQGTFTTEEREHMSRSAAAQDNGMMEIDNQEKSEEEPMPDEQ
YGYPKTDSRRWVSCIRVLDPKAAATTCLLELQENEAAFSICCVNFHDNKNLGTVLAVGTA
KDLEWWPKRRSMGGFIHIYRFVEDGRSLELVHKTPIDGVPTALCQFQGRLLAGIGQILRI
YDLGKRKLLRKCENKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSS
PRWLTASLHIDFDTMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKV
EEIIQFHVGEVVTCMQKASLIPGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEMHMR
QEHPPLCGRDHMAFRSAYFPVKDVIDGDLCEQYPTLPPDLQRKIAEELDRTPGEVMKKLE
DIRNRII
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgttcttgtacagcctgacgctgcagcgcgccactgggatcgtgtgcgcctgctacggc
aacttcatcggcggcaagagccaggagatcgtcatcggccgcggtaagatcctagagctc
ctgcgccccgacgacaatggcaagctccagacgctgctcgcggtggaaatatttggcgtc
gtccgctcgctcgcgcagttccgcctcaccggatcccacaaggattacctcgtcgtcggc
tccgactcgggcaagatcgtcatcctcgagtacaatcgcgacaggaacgccttcgatccc
gtccacaaggagacgtttgggaaatccgggtgccgccgcatcgtgcccggccagttcttg
tccgtggatccaaagggccgggcggtgatgatcgccgccaccgagaagcagaagctcgtc
tacgtgctcaaccgggacaacgcggccaggctcaccatttcctctcctttggaggctcac
aagtcccacaccgttgtctactccctcgtcggggtggactgtggctttgagaacccgatg
ttcgccgccatcgagctcgactactcggacgccgaccaggacgccacgggccaggcggcg
ctcgaggcacagaagcacctcactttctacgagctggacctgggactgaatcacgtcgtt
cgcaagtggagcgagcccatagacaatggtgccaacatgctcgtcaccgttcccggcggt
gccgatggacccagtggagtcttggtctgcgcggataacttcgtcatctacaagaaccag
tcccaagagctgagagctctgatccccaggcgagccgacttgccggcggacaggggtgtg
ctcgtcgtttcggccgcgacgcacaggcaaaagagcgtctttttctttctcctccagacc
gagtatggggatgtttttaaggtgacgctgagcttcaacgatacggatatggtggtgaca
gagctcaagatcaagtacttcgacacctttcccgtcacctcggcaatgtgcgttctcaag
agcggcttcctctttgctgcttccgagtttggaaaccatgcgctctatcagttccagggt
attggcgacgacccggacgtagaatcctcttctgcaactctcgaggagaccgaagatggt
tttaagcccatctttttccagccccgcaagctcaagaacttgatccagattgacgagggg
gagagcctcatgccaattatggacatgaagattgccaacttgttcgaagaggaaacgccc
cagattttcgtggcttgcgggagaggtcctcgctcgacgctgcggatactcaggccgggt
cttgcagtgtccgagatggcagtgtcacagcttccgggagtaccgagtgctgtgtggacg
gtgaagaagagtgtcaccgacgagttcgatgcctacatcgtggtgtcctttctgaacgcc
acgctggtgctgtccatcggcgaaacagtggaggaagtcagtgacagcggatttctggac
acgacaccttctcttcaagtttctctgctcggggacgactcgctaatgcaggtgtatccc
aatgggatccgacacattcggtcattagtgcgcataaacgagtggaaaactcccggcaag
aagaccatcgtcaaagttggctccaacaggatgcaggtggtgataggcttgagcggcggt
gagctgatttacttcgagatggatccgacggggcagctcatggagatagagaagcgagaa
atgtcgggggatgtggcctgcttggctataggcccagttccagaaggcaggcagcgttct
cggttcctcgctgttggctcctacgacaacaccatccgcatcctctcgctcgaccccaac
gattgcatgcacatcttgagcgtccagatggtggcttccccaccagagtcactgctcttg
ctcgaagttcaggcgtcaacaggtggagaagatggtgcagtgtatccagcgagtgttttc
ctcaacgccggccttcagaacggcgttcttctcaggactgaagttgacatggtcaccggg
cagctatctgggactcgaacgaggtttctgggcctgagagctcccaagctctttgcgacg
tctgttcggggccgtcaggcactcttgtgcctctccagtcggccgtggctcggttacatt
caccagggacacttcctcctgactccactttcttacgagaccctggagtatgcggcctcc
ttctcatcggaccaatgcgcagagggtgttgtggccgtggctggcgaagcgctgcgagtc
ttcacgattgagaggctcggggagactttcaaccagacgtccatccaacttcgatacacg
cccaggaagtttatcctgcatcccaagcggaagtttctggtgctcatcgagaccgaccag
gggacgttcacgaccgaggagcgcgaacacatgagcaggagcgctgcagctcaagacaat
gggatgatggagatcgacaaccaggagaagtccgaggaggagccaatgcccgacgagcag
tatggctatcccaaaaccgactcgaggaggtgggtgtcgtgcatcagagtcctggatccc
aaggcagcggccacaacgtgcctgctggagctgcaggagaacgaggcggcctttagcatc
tgctgcgtcaactttcacgacaacaagaacctcggaacagttcttgctgtgggtactgcc
aaggacttggagtggtggcccaagcggagatcgatgggtggcttcatccacatataccgg
tttgtcgaggacggcagatctctggagctggtgcacaagacacccatcgacggcgttccg
accgctctctgccagttccagggccgtctgcttgccggcatcgggcagatacttcggatc
tacgaccttggcaagcggaagctgctgaggaaatgcgagaacaaaaacttcccgaacacc
atcacctccatccacagttacggcgacaggatctacgtgggcgacatccaagagtccttc
cactacgtcaagtaccggcgagacgaaaaccagctctacgccttcgccgacgatagcagc
cccaggtggctgacagcgtcgctgcacatcgacttcgacaccatggccgcgggagacaag
ttcgggaacctcttcttcgtgcggctgccgcaagacctgtcggaggagatcgaggacgac
ccgacgggtggcaagataaagtgggagcagggccggctcaacggagctcccaacaaggtg
gaggagatcatccagttccacgtcggggaagtggtgacgtgcatgcaaaaggcgtcgctc
atcccaggcgggggcgagagcgtgatctatggcacggtcatgggctctgtgggggcgctg
ctgccattctcgtcgcgagaggacgtggatttcttctcgcacttggagatgcatatgcga
caggagcatccaccgctgtgcggccgcgatcacatggcttttcgctcggcctacttccct
gtcaaggatgttattgatggagatctatgcgaacaatatcccacacttccgccagactta
cagcgcaaaattgccgaggagctggacaggactcccggagaggtgatgaagaagctagag
gacatcaggaaccggatcatctga

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