Selaginella moellendorffii: SELMODRAFT_184091
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Entry
SELMODRAFT_184091 CDS
T01496
Symbol
PGP4C-2
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_184091 (PGP4C-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_184091 (PGP4C-2)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_184091 (PGP4C-2)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_184091 (PGP4C-2)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_184091 (PGP4C-2)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_184091 (PGP4C-2)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_184091 (PGP4C-2)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_184091 (PGP4C-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_30
Zeta_toxin
RsgA_GTPase
AAA_16
AAA_15
AAA_21
SbcC_Walker_B
DUF87
APS_kinase
DUF815
Motif
Other DBs
NCBI-GeneID:
9639281
NCBI-ProteinID:
XP_002988773
JGI:
184091
UniProt:
D8SZI3
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MDHPKKAGDRSVAFYKLFSFADGLDLFLMLLGSFGAVGNGIAMPLMTIIFGQLTNAFGES
AGNTSQVVDTVSRVALRFLYLGCGSAIAALLELCCWMCTGERQAARIRSLYLKAILRQDI
PFFDTETNTGEVMSRMSGDTILIQEAMGEKVGKFIQLSTTFLGGFVIAFVKGWRLALVLL
SVIPLLVATGGAMAILTSRMATRGQMAYAEAGTLVEQIVGGIKTVASFGGEKQAVDKYDK
ALDKAYRAGVRQSVVAGAGLGALLCVVFGSYAFALWYGSKLILHRGYTGGDVLNVIFAVL
MGGSSLGQASPCISAFAAGRAAACKMFEAIHRKPSIDASDMGGLTPDRVVGDIELRSVSF
RYPARPEVAVFDNFSLAIPSGITAALVGESGSGKSTVVSLIERFYDPQAGAVLLDGIDVR
RLQVKWLREQIGLVSQEPVLFGASIKDNISYGKDGATDEEIKRAAALANASKFIDKMPQG
YSTHVGDHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQDALDGIMVH
RTTVIVAHRLSTIKNANCIAVVQRGNVVEKGTHSELLQKPDGAYSQLVRLQEQHDERSKH
SLAKVDPDEVVEQSVPQRSLSRASSSRGSFGSRLLRSFSAAARSAIEENANNNANNKSEE
EKPQLTQAFLRLAALNKPEAPLAVAGGLAAAGHGVLFPLFGLLLSNMIGTFFETSRHKLR
KDVDFWSAIFTALAAACLIVVPAQIASFGLIGQRLIRRIRRQSFGAVVRQDIGWFDDPSN
SSGAISARLSTDAAYVRSLVGDSMSLAVQNVATIVTGLIIAFAANWTLALLILALVPLLA
LQGATQTKMMTGFSKNAKETYQDATKVANDAVSSIRTVASYCMEQKMVRLYMQKCEVTSK
SGIRNGMVSGAALGFSNFVLYGSYALSFWYGARLVEEGKTTFQKVFRVFFAITMSALGVS
QAVTLAPDLVKVKASVRSIFATLDRKSKIDPFNAEGKALEGMKGDIEFRHVSFRYPSRPD
AQVFRDMCFSLEAGKTMALVGESGSGKSTVIALLERFYDPDSGEILIDGINIKTMSLRWL
RQHIGLVSQEPILFSGTIRSNIAYAREGRVAEEEIEAAATTANAHKFISALPDGYNTQVG
DRGMQLSGGQKQRVAIARAVAKEPRILLLDEATSALDAESESVVQEALDRIMVGKTTLIV
AHRLSTIVGVDVIAVVNNGVIVERGSHSQLMSKPNGAYASLVKLHLSSPAK
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatcatccaaagaaggcgggcgaccgtagcgttgcattctacaagctctttagcttc
gcagacggcttggatttgttcctcatgctcctgggatcctttggcgccgtggggaacggg
atcgcaatgccactcatgaccatcatctttggccaactgacaaacgctttcggggaatcg
gcaggaaacacgagccaagttgtggacaccgtgtctcgggtggcgctgcgtttcctttac
cttggctgtggatctgctattgcggctctcctggagctgtgctgttggatgtgcacggga
gagcggcaagcagctcgtatcaggagcctgtatctcaaggccattttgcggcaggacatc
ccattctttgacacggagaccaacacaggcgaggtgatgagccggatgtctggtgacacc
atcctcatccaagaggccatgggggaaaaggttgggaagttcatccagcttagcacaacc
ttcttgggtggcttcgtcattgcatttgtcaagggctggcgcttggcactcgtcctgctc
tcggtcatccctttgctcgtcgccactggcggtgcaatggccattctcacgtccagaatg
gcaactagaggacagatggcgtatgccgaggcaggaactctcgtggagcagattgtcggt
ggcatcaaaactgttgcgtcttttggtggcgaaaagcaggctgtggacaagtacgacaag
gcgcttgacaaggcgtaccgagctggagtccggcagagtgttgttgccggagccgggctg
ggagctctcctgtgtgtggtgttcggcagctatgcatttgcactgtggtatggatcaaag
ctgatactgcatcgaggctacacgggtggtgacgtcctcaatgtcatcttcgcagtactc
atgggcggatcgtccctgggccaggcttcaccttgtatcagcgcgtttgctgcgggaagg
gcagcggcatgcaagatgtttgaagccatccacaggaagcctagtatcgatgcgtcggac
atgggtggcctaacgcccgaccgggtggttggtgacattgagctccgcagcgtgagcttc
agatatcccgcgcgcccggaggtagccgtctttgacaatttctctctggccataccatcc
ggcataaccgctgctttggtgggggagagcggtagcggcaagtctactgttgtcagctta
atcgagaggttctatgatccacaggctggggcggtccttttagacggcattgacgtacgc
cgtctgcaagtcaaatggctgcgagaacaaattggcctcgtaagccaggagccggtactc
tttggtgcctctatcaaggacaatatatcctatgggaaagatggcgccactgacgaggaa
atcaagcgcgctgccgctcttgcaaacgcttccaagttcatagacaagatgcctcagggt
tacagcacgcacgttggagatcatggaacacagctttcgggaggtcagaagcagaggatc
gcaatcgccagagctatcctcaagaaccctcgcattcttctccttgacgaagctaccagt
gctctggatgccgagtcggagagggttgtccaggatgctctggacgggatcatggtgcac
cggacaactgtcatcgtagcccatagattgtctaccatcaagaacgcaaactgcatcgct
gtggttcagcgaggaaacgtggttgagaaaggcacacactcggagctgctacagaaaccg
gatggcgcctactcccagctggtgcgcctgcaagagcaacatgacgagagatccaagcac
agcctggccaaagtggacccagacgaggtcgtcgagcagagcgtccctcaaagatctcta
agcagggctagcagcagtcgcggctcgtttgggagcagacttctgagaagctttagtgct
gctgcaaggtcggccatcgaggagaatgccaataacaatgccaacaataagagcgaggaa
gagaaaccacaattgacgcaggcatttcttcgtctcgcagccttgaacaagcccgaggca
ccgctggccgttgccggtgggctagccgccgctggacacggtgtgctatttccactcttt
gggctgcttctgtccaacatgatcgggacgtttttcgagacgagcaggcacaagctacga
aaggatgtggatttctggtcggccattttcacggctctggcagcggcatgtttgattgtt
gttccggcacagatcgcgtctttcgggttaattggccagcgcttgattcgacgcatcagg
aggcagtcgtttggtgcggttgttcgccaggatatcggctggttcgacgatcccagcaac
tccagtggagctatcagtgctcgtttatcaaccgacgcagcttacgtccgtagcctggtc
ggagactccatgtcgttggctgttcagaatgttgcaaccattgttaccgggttgataatc
gccttcgctgcaaactggacgctggctctgctaatccttgcattggtccctctacttgcc
cttcagggcgcaacacagacgaagatgatgactggtttcagcaagaacgcaaaggaaaca
tatcaagatgcaaccaaagttgcaaacgatgctgttagtagcatccgcacagtggcgtcg
tattgcatggagcaaaagatggtcaggctttacatgcaaaagtgtgaagttacgtccaag
agtgggatacggaacgggatggtgagtggagctgcgcttggtttttcaaacttcgtactc
tatggctcgtatgcactcagtttctggtacggagctcgtctagtggaggaaggaaagacg
acgtttcagaaagttttccgggtgttttttgctatcacaatgagtgctttgggagtttct
caggccgtgacattggctcctgatctggtcaaagtgaaggcctcggtcagatcaattttt
gcaacccttgacaggaagtctaagattgatcccttcaacgccgaaggcaaggcgctggaa
ggaatgaagggcgacatcgagttccggcatgtgagcttcagatacccgtcacgtcctgat
gcgcaagtgtttcgtgacatgtgcttctcactggaagctggaaagacaatggccctggta
ggggaaagtgggagcgggaagtcaactgtcatcgctctcttggaaagattctacgatcct
gatagcggcgagatactcatcgacgggatcaacatcaaaacgatgagcctgaggtggcta
cgccaacacattggactggtgagccaagaaccaattctgttcagcggcaccatacggtcc
aacattgcgtatgcaagagaggggagggtggcggaggaggaaatcgaggccgcagcaacg
accgcaaacgctcacaagttcatctcggccttacccgacggctacaacactcaggttggc
gaccgcggcatgcagttgtctgggggacagaagcagcgagttgccatcgccagagccgtg
gccaaggagcccaggattctgctgctggacgaggcaaccagtgccttggatgcggaatct
gagagcgttgtccaggaggcattggacaggatcatggttggcaagacaacgctaattgtt
gcgcaccggctgtcaacaattgttggcgtggacgtgatcgccgttgtgaacaacggggtg
attgtggagcgagggagccattcccagctcatgagcaagccgaatggagcttatgcctcg
ctggtgaagctgcatctatcatcgccggccaagtag
DBGET
integrated database retrieval system
