Selaginella moellendorffii: SELMODRAFT_185249
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Entry
SELMODRAFT_185249 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_185249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_185249
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SELMODRAFT_185249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
DUF6594
Motif
Other DBs
NCBI-GeneID:
9631190
NCBI-ProteinID:
XP_002990371
JGI:
185249
UniProt:
D8T443
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MAGGSQDMRSWADLLQNSSQLLQSAAPAAPFPPLQARNLCRSLDQLESLSRQLKARTNRY
DATGQSIAATRLLAREGINADQLARELKAFELKTSFEDVFPVEATTVEEYLQQVHEMSML
TAILNSQRDNVRSFDDYMMKSLEDDWQKEKREFLNSLSRLPLSSGTPGKQASRVSGVLDS
SAVKALPDMRAPNPFLSTPSQVVNAKAAGYAEAVAKLNAARERSEPFKVASTLKDTFLAF
ADEKMGTKSVNMAKIWYLLQSLLGEDFEYPSHLSRKMKMVFGARRHLEAGHEKYMLDTIQ
SHAAQAALGGSTGNLQRVRAFLRVRLRDYGLLDFDATDTHRQPPIDTTWYQIYFCLRSGY
YEEAKLVAQSSRASRSYAPLLTEWIATGGAVSSATATAAFEECEKMARIGDRPGRAGYDK
KKMLLYAVLSGSRQQAERLLRDIPVLFTTIEDFMWFMLSITRDCGPAPQDGLVPYTLEDL
QNYLTKFEPSYYTKNGKDPLVYPYVLLLSLQLQAAILYLTREISNDGDHIDGVHIAIALA
DHGVLSEGASNKAKPGTMSPVGEITSIIRHYGLSYVRQNNLATALEYYVQAAAAIGGGAI
SWSGQNSNDQQRQRNMMLKQLLIELLLRDGGIALLLGSNGIGSEGALRRFLPDPTMQQQM
LLEAARHAQESGLYEKAIELLKRVGAFAMALEIVTRRLSEAICALATGRADGEAKVAGLI
LAGNDIAETYKKQAGSGTGSSREAEQVTEQQVSFRQLEGIVAFHKLFRLGRYPDAIAELP
RLSFLPLTPWTPEKSAEDLRSISPPVQACVPDLLKAALICLDNVPDRDGHMRTLKAKIAK
FVANTVPRNWPHDLYEQVARML
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggttctcaggacatgcgcagctgggcggatcttctccagaactcgtcgcag
ctgctgcaatcggccgcgccggcggcgccatttccaccgctccaggcaagaaatctttgc
aggagcttggatcagctagagtctctctcgcgccagcttaaggcccggacgaatcgctac
gatgccactggccaatctattgccgctactcgattactagcgagagaaggcataaatgcc
gatcaacttgccagagagctaaaggcgtttgagctcaagacaagcttcgaagatgttttc
cctgtggaagcgacgaccgtggaggagtatctacagcaggtgcatgaaatgtcaatgctt
acagcgattttgaattctcaaagagacaacgttcgaagttttgatgactacatgatgaag
tcactggaagatgactggcaaaaagagaagcgtgagtttttgaatagcttgagtcgcttg
ccactttcttctggcactcccgggaaacaagccagtcgtgtttctggtgttctcgactct
tctgcggtgaaggctttgcctgatatgcgcgcaccaaacccgtttctatcaactccgtcg
caagtggtgaatgcaaaggctgcggggtacgctgaagcagttgcgaagcttaatgctgca
agagaacgaagtgaaccattcaaggttgcgagcactctgaaagacacgtttttggcgttt
gctgatgagaaaatgggtacaaaatctgtgaacatggccaaaatctggtatctccttcag
tctcttttaggtgaggacttcgaatatccatctcatcttagtagaaagatgaaaatggtt
tttggtgcccgccgccatttggaagctggtcatgaaaagtatatgctggacacaatacaa
agtcatgctgctcaggcagcacttggaggatctactggaaacttacaacgtgtacgagct
tttttgcgcgtccggctaagagattatggtttgttagacttcgatgctactgatacacat
aggcaaccgccaattgatactacttggtaccagatttatttttgcctccgatctggttat
tatgaggaagccaaacttgtggcgcagtcgtctagagctagccgttcgtatgctccactg
cttacggagtggatcgccacgggaggagcagtatcttctgctactgcaacggccgccttt
gaggaatgtgaaaaaatggcacggattggggacaggccaggtcgtgctggatacgataag
aagaaaatgcttctatatgctgttctttccggtagcaggcagcaagctgaacgtcttcta
cgggacattcctgtgctattcactacgatcgaggactttatgtggtttatgctttctatt
actcgggactgcggtccagcaccccaagatggattagtaccttatactttggaggatttg
cagaactacctgaccaaattcgagccatcttactatactaagaacggcaaagatcctttg
gtctatccttacgttctgctattaagcttacaactccaggcggccatcctttatcttaca
agagagatcagcaacgacggggaccatatagacggtgtgcatatagccattgctttggca
gaccatggtgtcctttcagaaggcgcgtcgaacaaagcaaagcctggaacaatgagtccg
gttggagaaatcacaagcatcatccgacactatggactttcatatgtccggcaaaacaac
cttgcgacggctttggagtactacgttcaggctgctgctgccattggaggtggcgctatt
tcctggagcggacagaacagtaatgatcagcagaggcaaaggaacatgatgttgaagcag
ctactcatcgagcttcttctaagagatggtggtattgcacttctgctaggctcaaacggc
atcgggtcggaaggtgcgttgagaaggtttttgcccgatcccactatgcagcagcagatg
ttacttgaagctgcacgacatgctcaagagtcaggcctttacgagaaggctatcgagttg
ctgaaacgtgttggagcctttgcaatggctctagaaatagtaactcgcaggctttctgag
gcaatctgcgcactggccactggccgtgcagatggagaggccaaagttgcaggccttatc
cttgctgggaacgacattgcggagacttacaaaaagcaagctggaagcggaactggaagc
tcgcgagaggctgaacaagtaacagagcagcaagtttccttccggcaacttgaaggaatc
gtagcgttccacaaactgtttcgcctggggagatatccggacgcgatcgctgagcttccc
aggctgtcatttcttccactgactccatggacaccggaaaagagtgccgaagacctgaga
agcatatctcctcctgttcaagcttgtgtgcctgatcttctcaaggcggctttgatctgc
cttgataatgttcccgatagagatggccatatgcgcactctcaaggctaagatcgccaaa
tttgttgcaaacaccgtgcccagaaattggccgcacgatctgtacgagcaagtcgctcga
atgctttaa
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