Selaginella moellendorffii: SELMODRAFT_186330
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Entry
SELMODRAFT_186330 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_186330
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_186330
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_186330
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_186330
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_186330
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
SELMODRAFT_186330
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
SELMODRAFT_186330
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SELMODRAFT_186330
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SELMODRAFT_186330
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SELMODRAFT_186330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
9644107
NCBI-ProteinID:
XP_002991790
JGI:
186330
UniProt:
D8T291
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MDPAVLDDIITRLLDVRNGRPGKQVQLSEAEIRQLCLTAKDIFLSQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNIRLWKTFTDCFNCLPVSALVDEKILCMHGGLSPDMKSL
DMIRKISRPTDVPDTGLLCDLLWADPDKDVTGWGSNDRGVSYTFGADVVGDFLQKHDLDL
VCRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKKG
AGK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatccggccgtcttggacgatattatcacgcgccttctcgacgttcgcaatggccgc
ccagggaaacaggtccagttgtctgaggcggagatccggcagctttgcctcactgccaag
gacatcttcctgtcgcagcccaatttgctggagctcgaggcgcccatcaagatctgcgga
gatattcacggccagtattcagatttgctcaggcttttcgagtatggtggcttccccccg
gccgcaaactatctcttcttgggcgactacgtggaccgtgggaagcagagcctggaaacc
atctgccttctcctggcctataagattaagtatccggagaacttcttcttgttgagaggg
aaccatgaatgcgcctccatcaaccggatatatggtttctacgatgagtgtaagaggaga
ttcaatatcagattgtggaagacattcacagattgcttcaactgtctaccagtatcagcg
ctggtggatgagaagatactgtgcatgcacgggggcctctccccggacatgaagagcttg
gacatgatccggaagatctcccggccaacagacgtcccggacactgggctcttatgtgat
cttctctgggcggacccggacaaggacgtaacaggctggggtagcaacgaccgtggggtg
tcttacacgtttggagcggacgtggtaggggactttctccaaaagcatgacttggatctc
gtgtgccgagctcatcaggtagtcgaggacggctacgagttctttgcgaagcggcagctt
gtaacaatattctcggcccccaactattgcggcgaatttgacaacgcaggagcgatgatg
agcgtggacgatacgctcatgtgttctttccagatcctcaagccggcggacaagaaggga
gcaggcaagtga
DBGET
integrated database retrieval system