Selaginella moellendorffii: SELMODRAFT_186944
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Entry
SELMODRAFT_186944 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_186944
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
SELMODRAFT_186944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_EZ
TOR1L1_N
HEAT_ECM29
HEAT_2
TPR_Trm732_C
Vac14_Fab1_bd
TPR_TNPO3_IPO13_3rd
ARM_ECM29
IFRD
HEAT_GCN1
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
9630540
NCBI-ProteinID:
XP_002992706
JGI:
186944
UniProt:
D8TAU2
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MAQQQQQQQSSRLNRLLTLLDTGSTSATRLTAAKQIGEIAKQHPTELQALLKRVGHFLRS
KSWETRVAAAHAIGSIAENVSHAWRSVGTFLRHSVCAAPNGGFIARFDVHKVLESGRLLL
ASGGQEFDVSLDSTKTSVERLAHQKQNLRRRLGKSFTYDFVDVNDMIRDEDLMMQRTPVG
DSSIHNHVYQRQEVQQLVANMVPGVLPRTLSAREKNMLKRKAKFFVKDGSKEEAELEEPS
NKRPKSVVNEQSQQQTDKVFYSASLFLVLDSVLEEDGQDIFADGRWPFSRFVEALMHDIF
DPVWEIRHGSIMALREILSSQAASAAKDGDKMELEKTWRANSEFLQDCTIRLICIFSLDR
FGDFVSDQVVAPVRETCAQVLGAVLKQMHSPLVHETFSILLQMQRRSEWEVRHGSLLGIK
YLVAVRQEMIGELLPRVLPACIAGLEDPDDDVRSVAADALFPAARAIVTHASHLVKTILI
LLWDILLDLDDLSPSTNSVMHLLAELYSQPEALLPLNSTSSIDLNADMALDEQQQDLDDL
SVLAPRLWPFMRHNISSVRYAAIRTLVRSSQDFSGSTCWALRILDDMLRMVFQNLLMESN
EEILQCSGRVWRLLIQVCSHSHLQPSTLSFFPTWLKLASTAAGASLEASNMFSPTSLPKG
SRSKVVAKLSASKLISRGESHSHGPEAQKHSDVVPKVVVGADGENSAVYMRIATTSALGV
LAGNVPGSMLDLIFQALNQALHSPSGIQRQKKAPVISAFRPLTSYLQVLLLQIEPSHPTP
DSSLPYAELSRTYAKMRAEVAALVKHAEASNFGLPVDLQPVENMSVEAAIDAAMKFIPLE
ECNGAVSDEKTCSARDMMESARQRLLATAGYLKCVQVNLHGTVLALMASVVVWMGELPSK
LNPIIQPLMGSVKREQEEVLQQCAAEALAEVIGHCVGRKPCPNDKLIKNLSTMACADQLE
TPLATEANSSWTFDDGDYSLKSSSTALRKMEVASIDDKAKVEGIITRRGAELALKALCQR
FGDSLFEKLPRLWDCLTEVIKPSDPGHIHDAFLVEPVADPQALVNNLQLIRVTAPFLKNA
MQSRILTLLPAIFGCVRHRHAAVRCGASRCITAMARTLKETIMTAVLAKAMPMLTDGTSM
EARQGAGMLVTFLVEGMGMELVGYAPFLIVPLLGCMGDSNQVVRQSVTHSFAALVPLLPL
ARGVPQPEGISSLSNSADARFLEQLLDNSRVDDYKLAFDLKTPLRRYQQEGINWLAFLKR
FKLHGVLCDDMGLGKTLQASAIVASDMAERIAAGQGKESTLSLIVCPPTLVGHWIYEIEK
FIPAELLKPLQYVGQPQDRLYLRNQFSAHSIIITSYDVLRKDIEHLSQIQWNFCILDEGH
IIKSGKSKITLAVKRIQAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFHGSYGK
PLQAARDPKCSAKEAEAGVLAMEALHKQVMPFLLRRTKDEVLADLPPKIIQDRYCDLSSL
QLKLYEKFAFSQAKKNVATMVEAYGGNADDRGNTSAPTHVFQALQYLRKVCSHPVLVLDG
PLSENVNEENGSMDIHDIQNSPKLLALRDILEECGIGQCNGDNSTAGGQHRVLIFAQLKG
FLDIIEKDLFQTHMKSVTYMRLDGSVDVSKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNL
TAADTVVFMEHDWNPMRDLQAMDRSHRLGQRRVVNVHRLIMRGTLEEKVMNLQRFKLSIA
NTVINADNASISSMDTGQLLDLFTFDGKKANVPGTSKDKEEEAAGSSGSKGGKGLKSMLS
SLEDLWDQSLYHEEYNLGQFVSRLK
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcagcagcagcagcaatcgtctcggttgaaccggctgctgacgctcctc
gacactggatccacttccgcgacgaggctcactgctgcgaagcagattggcgagattgcg
aagcagcaccccactgaattgcaagctctcctgaaaagagttgggcacttcctccgaagc
aagagctgggaaacgcgtgtggccgccgctcatgcaattggatccatcgccgagaatgtg
agtcatgcctggcgttcagtaggtacatttctccgacatagtgtttgcgctgcgcctaac
ggtggttttatcgccaggtttgatgttcacaaagttttggagtcgggccggctattgctt
gcatccggtggtcaggaatttgatgtttcgctcgacagtacaaagacttcagtggaaagg
ctggcacaccagaagcaaaatttgcgtcgccgactgggtaaaagctttacttacgacttc
gtcgatgtcaatgacatgattcgtgacgaggatctcatgatgcagagaacaccagttggc
gatagtagcattcacaatcatgtgtaccagcggcaggaagttcaacaattggttgccaac
atggttccgggtgtccttccaaggacactaagtgcgagagagaagaacatgcttaaacgc
aaagctaaattttttgttaaagatggatcgaaggaggaagcggagctagaagagcctagt
aacaagcgtcctaaatctgttgtgaatgagcaatcacaacaacaaactgataaggtattc
tatagcgcttcgttgtttctcgtgttagattctgtgctagaggaggacggtcaggacatt
tttgccgacggtcgctggccattttcccgctttgtggaggctctcatgcatgatattttc
gatcctgtctgggaaattcgccatggtagtatcatggcgcttagagaaatattaagctca
caagcagcttctgctgccaaggacggagacaagatggagctcgagaagacatggcgagca
aactcggagtttcttcaagattgcactattcggcttatttgtatcttttctcttgatcga
tttggtgactttgtttcggaccaagtggttgcgcctgtgcgagaaacttgtgctcaagtt
ctgggtgcggtgctcaagcaaatgcattcgccgctagttcatgaaactttcagtatcctt
cttcagatgcagcggcgttcagagtgggaggtcagacatggcagtttattgggcatcaag
tacctggtggcagtccgacaggaaatgataggtgaacttcttcctcgggttttacctgcc
tgtatagctggacttgaagatcctgatgacgacgtgagatcagttgcagcagacgctttg
tttccagctgcccgcgcaattgtgactcatgcgagtcatctggtaaaaactatcctgatc
ttgctgtgggatattctacttgatctggatgacttgagtccttcgactaacagtgtaatg
catcttctggctgagctttattcacagcctgaagcgttacttccactgaattctacatct
tcgattgacttgaatgcggacatggctctggacgagcaacaacaggatttggatgattta
tctgtcttagccccccggctttggccttttatgcggcataatatttcatccgtgagatat
gctgctattcgaactctggtacgttcttcgcaagatttctcgggatcgacatgttgggct
ctacgcatccttgacgatatgctgcgcatggtctttcagaatttgcttatggaatcaaac
gaagaaattctgcagtgttctgggcgcgtctggcgtctattgattcaggtatgttcacat
tcgcatttgcaaccatcgacgctatccttctttccaacgtggctgaagcttgccagcacc
gcggctggtgcttctttggaagcctcgaatatgttttcgcccacgtctctaccaaaagga
agccgttctaaagtggtggctaagctaagtgcatctaaacttataagccgaggagagtct
cactcgcatggtccagaagcccaaaaacattctgacgtggttccgaaagtagttgttggt
gctgacggagagaattctgctgtatatatgaggattgccactacatctgccttgggagtt
ttggctgggaacgtacctggttcaatgctggaccttatatttcaggctctaaaccaagct
ttacattcgccctcaggtatccagagacagaagaaggcgccggtgatttctgcttttcga
cctttaacatcatatttacaagtgctccttttacaaattgagccttcgcatccgactccg
gactcttctttgccttacgcggaactttcgagaacttacgctaagatgagggcggaagtt
gccgcactcgttaagcatgctgaggcttcgaactttggattaccagtggacttgcaacca
gtggaaaacatgtccgtagaagctgctatagacgctgcaatgaagtttattcctttggag
gaatgcaatggagcagtttccgatgagaaaacttgctccgctcgagacatgatggagtct
gctcgacagcgtcttcttgctaccgcaggctatctaaaatgtgttcaggttaatctgcat
ggcacagttttggctttgatggctagtgtggtcgtatggatgggcgagctaccgtcgaag
ctgaatcctatcatccaacctttgatgggctccgtcaagcgtgaacaggaggaagtactg
cagcagtgcgcagcagaagctttggcagaagtgattggacactgtgttggtcggaaaccg
tgtcctaatgacaagcttatcaaaaacctgtctaccatggcatgtgctgatcagcttgaa
actccattggcgactgaagcgaactcgtcctggaccttcgatgatggtgactattcattg
aaatcttcatcgactgcgttacgaaagatggaagttgcttccattgacgacaaagcaaag
gttgaaggaataattacgagacgtggtgcagaactggcacttaaggcgctttgccagagg
tttggtgattctcttttcgaaaagcttccgaggctctgggactgcctaactgaagtaatc
aagccttccgatcctggtcatattcacgatgcgtttctagtagaaccagttgccgatcct
caagcgcttgttaacaacctgcagcttatacgcgttactgctcctttcctaaaaaatgcc
atgcaatcgaggatattaacactcctccctgcaatatttggctgcgttcgacatcgtcat
gcggctgtaagatgtggtgcgtcaagatgtatcacagcgatggcccgaaccttgaaagag
acgatcatgactgctgtcctagcaaaggccatgccaatgcttactgatggtacatctatg
gaggcaagacaaggagcagggatgctggtgacgtttcttgtcgaaggcatgggaatggaa
ctcgtaggatacgctccgtttctcatcgttccgttgctgggctgcatgggtgacagcaac
caggttgtcaggcaaagcgtgactcacagttttgccgccttggttccacttcttccactt
gctcgaggggtaccacagccagaaggtatctcctctctaagtaactcagccgatgccagg
tttttggaacaattactggataacagtcgcgtcgacgactataagctggcgtttgattta
aaaactccgctacgcaggtatcaacaagaaggtatcaactggctagctttcttaaagcgt
tttaagctccatggtgttttgtgcgatgacatgggtctgggaaagacccttcaagcttct
gcgattgttgcttcagatatggctgagcgtattgctgctggccaggggaaagagtcgacg
ttatctttgatagtatgcccaccaacattagtgggtcactggatatacgagattgagaag
ttcataccggccgaacttctgaaacctttgcagtatgtggggcaacctcaggatcggtta
tacttgcgcaatcagttctcggctcacagtattataatcacatcttacgatgtgcttcga
aaggacatcgagcatctgagccaaatacagtggaacttctgcatcctagatgaaggacac
atcatcaaaagcgggaagtccaaaatcactctggctgtaaagagaattcaagccgagcac
agattaattctcagcggtactcctattcagaacaatgtactagaactatggtcattgttt
gattttcttatgccgggtttccttggaactgaacgccagttccatggtagctatggcaaa
cctttgcaagctgcaagagatccgaaatgttccgcgaaagaagctgaggccggggtgtta
gccatggaggccttgcacaagcaggtcatgccttttctgttgcgccggacaaaagatgaa
gtgctagcggatttacctcccaaaattattcaagaccgttactgtgacttgagttcgctt
cagctgaaactttatgaaaagtttgccttttctcaagccaagaagaatgtggccaccatg
gttgaggcgtacggtggaaatgctgatgaccgaggaaacacgtcagctcctacgcacgtc
tttcaggccctgcaatacctgcgaaaagtttgcagtcatcctgtgcttgtcctagacgga
cctctgtcagagaacgtcaatgaggagaatggcagcatggatatacatgatattcaaaac
tcgccaaagcttctggccttgcgagatattctcgaagaatgtggcatcggtcaatgcaac
ggcgataattctactgccgggggacaacatcgtgttttgatctttgcacaactaaagggt
tttcttgacattattgaaaaggatttgtttcaaacacacatgaaaagtgtgacatacatg
aggctcgatggctccgttgacgttagcaagcgttttgagattgtgaaggctttcaattct
gatccaacaatagacgtgcttcttctcactacacacgtgggtggcttgggattaaacctt
acagcagcagacacggttgtatttatggagcatgactggaatcctatgcgtgatttacag
gctatggacagatctcacaggcttggacaacggcgggtggttaatgtgcatagactgata
atgcgtggaactttagaggagaaggtcatgaaccttcaacgcttcaagctttccattgcg
aacacggttatcaatgcggacaacgcgagcattagcagtatggacacaggccagcttctc
gacttgtttacctttgacgggaagaaggctaatgtcccaggtacgagcaaggataaggag
gaagaggctgcaggatcgagtggctcgaaaggcggcaaaggactcaagtcgatgctaagc
tctttggaggatctctgggaccagtcactataccacgaggagtataatcttggtcagttc
gtctctcgcctcaagtga
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integrated database retrieval system
