Selaginella moellendorffii: SELMODRAFT_187457
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Entry
SELMODRAFT_187457 CDS
T01496
Symbol
ABH1-2
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
smo03015
mRNA surveillance pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_187457 (ABH1-2)
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_187457 (ABH1-2)
03015 mRNA surveillance pathway
SELMODRAFT_187457 (ABH1-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_187457 (ABH1-2)
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_187457 (ABH1-2)
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
SELMODRAFT_187457 (ABH1-2)
Spliceosome [BR:
smo03041
]
Common components
Common spliceosomal components
Cap binding complex
SELMODRAFT_187457 (ABH1-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
9640986
NCBI-ProteinID:
XP_002993408
JGI:
187457
UniProt:
D8TCU0
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MVIARDLRQYEDEILDVLIQCAEELPHKLPFYGAVVGLTNIEEANFVSRIVERVHSRLQD
ALNTEDCNRLRILLRFLAVLMCNNVISSTSLVEVFETLLSSAATTVDEEVGNPAWQPRAD
FYVSCILSSLPWCGFELQERAPEELERVMAAVEAYFSLRMQRPDSLLTPFYVDSSGTSPI
TGQDYVQEFWSRTQQLQQAGWKADSVPRPYASFESRLVTSQTLHQLKALACPAIPKPYTG
PKDLAFGRQTHEAETKYPQRTGRLRVFPPENSEKDMAPIDCFIVEEYLLDIMLYLNGSRK
ECAAFMVGLPVPFRYDYLMAEVVFGQMLLLPKPPFKLIYYTIVIIDLCKALPGSFPGLLA
AVVRNLFSRISELDVECRSRLSTWLSHHMSNFQFIWPWSDFAHVAEQPAWSPQRVFVQET
LEKEVRLSYWERLFSPVKSGWQSLDDSPKLCDLLPPKNTPEFRFSRDNQVEGLETETGFA
SELLAQIKTKKGMKDIESWFESKIVPAAGQKVAIEILLQTLLNLGSKSFTHMVTVLERYG
QLIATLAPDETLQVHVIDEVARFWQNSSQMIAIVVDRMMGYRLVSNLAVIRWSFKDENVQ
TFHTSGRVWELLGNAINKAGNRTADLQRDVVNAKRALDEADGAVSKAERNRSNVQELIDS
AETDDARKQATSKMEWVKTTVIKARGRQTAAQDLLETKEALLSGALREQDTLVCLVFQNL
VSTISSKHSKSDADGADTAEPEAMDVDADPSAAATEGNNNENNENQNESVASKGEDHPNE
ELKHWQRCTMGHLEAFCRQYAAEVWQMIEKLDQEVFTENANQEVIKVVYSAIKRPSLDKN
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgcgagggatttgaggcagtacgaggacgagattctcgatgttttgatccag
tgtgccgaggagcttccacacaagctgcccttttatggcgctgtggttggtctcacgaac
atagaggaggcaaattttgtttctcgaatcgttgagagagttcacagtcggctccaggat
gcactcaataccgaggattgtaacagattgagaatacttttacggttcctggcggtgttg
atgtgcaataacgtcatctcgtccacctccctcgttgaagtgtttgaaacgctcctgtct
tcagccgcaactactgttgatgaagaagttggaaacccggcctggcagccgcgagctgac
ttctacgtttcgtgtatcctgtcatcgcttccttggtgtggattcgagctgcaagagcga
gctccggaggagcttgagcgggttatggctgctgtagaggcatattttagccttagaatg
cagagaccggattccttactcactcctttctacgtggattctagtggaacttctccaatc
acgggtcaagactacgtacaggagttttggtccaggacacaacaattgcaacaagctgga
tggaaagctgacagtgttccgaggccatatgcttctttcgaatctcgactagtaacgtct
cagacccttcaccagctgaaggctctagcttgcccagctataccaaaaccatatactggt
ccaaaggatttggcttttgggaggcaaactcatgaagcggaaaccaaataccctcaaaga
accggtcgtttgcgggtttttcctccagaaaattcagagaaggatatggcccctatcgat
tgcttcattgtggaagagtatttgctggatataatgttgtacttgaatgggagtcgcaaa
gaatgcgcagctttcatggtagggctgcccgtgccatttcgttacgactaccttatggct
gaagttgttttcggacagatgcttttacttcccaagcctccttttaagctgatttattac
actatagtcattattgatctctgcaaggctttacctggttcttttccgggcttgcttgct
gcggtcgtacgaaatctgttcagcagaattagtgagctagatgttgaatgcagatctcgt
ctcagcacatggctttctcatcacatgtctaattttcaatttatctggccatggagcgat
tttgctcacgttgctgagcaaccggcatggtcacctcaacgagtctttgttcaggagacg
ttggagaaggaagttcgcttgtcatattgggaaagacttttctcacctgtcaaatctgga
tggcagagtttggacgattctccaaagctttgtgacttacttcctccaaaaaacactcca
gagttcagatttagtcgggacaaccaagtagaaggtttggagacagagacggggtttgct
tctgagttactggcacagatcaaaacaaagaagggaatgaaagacatagagtcgtggttt
gaaagcaagattgttcctgctgctggtcaaaaagttgcaatcgagatcctgcttcaaaca
cttctcaacttggggtcaaaaagtttcacacacatggtcactgtgctcgagagatatggt
caactcattgctacgcttgcaccagatgagacgttacaagtacatgtgatcgacgaggtt
gccaggttctggcagaattcatctcaaatgatcgcgattgtggtggaccgcatgatgggc
tacaggttggtatccaatctggcagttatcaggtggtcctttaaggacgaaaacgttcaa
acttttcacacttctggccgggtctgggagcttctgggaaatgcaatcaataaggcaggc
aatcgcaccgcagaccttcaaagggatgtggtaaacgccaaaagagcactagacgaagct
gatggagcagttagcaaagccgaaagaaaccgatcgaacgttcaagagctcattgattcg
gccgagactgacgatgcacggaaacaagctacgtctaagatggagtgggtcaaaacgacg
gttataaaagcaagaggtcgacaaactgctgctcaggatctacttgaaacgaaggaggct
ttactctcgggagctcttagggagcaagacacgcttgtgtgtttggtgttccagaacctt
gtctcaactatatcttccaagcattcgaaaagtgatgctgatggtgctgatactgcggag
ccggaagctatggatgtcgacgctgatccttctgcagctgcaacagaaggcaataacaac
gagaacaacgaaaaccagaatgaaagtgtggcaagcaagggggaagatcatccgaacgag
gagctcaagcactggcaaagatgcacgatgggacaccttgaggcattttgtcgccagtac
gccgcagaggtctggcagatgatcgagaaactcgatcaagaagtgttcacggaaaatgca
aaccaggaagtcatcaaagttgtctactctgccattaagcgcccaagcttggacaagaac
taa
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