Selaginella moellendorffii: SELMODRAFT_187576
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Entry
SELMODRAFT_187576 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_187576
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
SELMODRAFT_187576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_EZ
TOR1L1_N
HEAT_ECM29
HEAT_2
TPR_Trm732_C
Vac14_Fab1_bd
ARM_ECM29
IFRD
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
9638437
NCBI-ProteinID:
XP_002993735
JGI:
187576
UniProt:
D8TDQ9
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MAQQQQQQQSSRLNRLLTLLDTGSTSATRLTAAKQIGEIAKQHPTELQALLKRVGHFLRS
KSWETRVAAAHAIGSIAENVSHAWRSVGTFLRHRVCAAPNGGFIARFDVHKVLESGRLLL
ASGGQEFDVSLDSTKTSVERLAHQKQNLRRRLGKSFTCIFVDVNDMIRDEDLMMQRTPVG
DSSIHNHVYQRQEVQQLVANMVPGVLPRTLSAREKNMLKRKAKFFVKDGSKEEAELEEPS
NKRPKSVVNEQSQQQTDKVFYSASLFLVLDSVLEEDGQDIFADGRWPFSRFVEALMHDIF
DPVWEIRHGSIMALREILSSQAASAAGGDKMELAAAQEAWRANSEFLQDCTIRLICIFSL
DRFGDFVSDQVVAPVRETCAQVLGAVLKQMHSPLVHETFSILLQMQRRSEWEVRHGSLLG
IKYLVAVRQEMIGELLPRVLPACIAGLEDPDDDVRSVAADALFPAARAIVTHASHLVKTI
LILLWDILLDLDDLSPSTNSVMHLLAELYSQPEALLPLNSTSSIDLNADMALDEQQQDLD
DLSVLAPRLWPFMRHNISSVRYAAIRTLVRSSQDFSGSTCWALRILDDMLRMVFQNLLME
SNEEILQCSGRVWRLLIQVCSHSHLQPSTLSFFPTWLKLASTAAGASLEASNMFSPTSLP
KGSRSKVVAKLSASKLISRGESHSHGPEAQKHSDVVPKVVVGADGENSAVYMRIATTSAL
GVLAGNVPGSMLDLIFQALNQALHSPSGIQRQKKAPVISAFRPLTSYLQVLLLQIEPSHP
TPDSSLPYAELSRTYAKMRAEVAALVKHAEASNFGLPVDLQPVENMSVEAAIDAAMKFIP
LEECNGAVSDEKTCSARDMMESARQRLLATAGYLKCVQVNLHGTVLALMASVVVWMGELP
SKLNPIIQPLMGSVKREQEEVLQQCAGEALAEVIGHCVGRKPCPNDKLIKNLSTMACADQ
LETPLATEANSSWTFDDGDYSLKSSSTALRKMEVASIDDKAKVEGIITRRGAELALKALC
QRFGDSLFEKLPRLWDCLTEVIKPSDPGHIHDAFLVEPVADPQALVNNLQLIRVTAPFLK
NAMQSRILTLLPAIFGCVRHRHAAVRCGASRCITAMARTLKETIMTAVLAKAMPMLTDGT
SMEARQGAGMLVTFLVEGMGMELVGYAPFLIVPLLGCMGDSNQVVRQSVTHSFAALVPLL
PLARGVPQPEGISSLSNSDDARFLEQLLDNSRVDDYKLAFDLKTPLRRYQQEGINWLAFL
KRFKLHGVLCDDMGLGKTLQASAIVASDMAERIAAGQGKESTLSLIVCPPTLVGHWIYEI
EKFIPAELLKPLQYVGQPQDRLYLRNQFSAHSIIITSYDVLRKDIEHLSQIQWNFCILDE
GHIIKSGKSKITLAVKRIQAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFHGSY
GKPLQAARDPKCSAKEAEAGVLAMEALHKQVMPFLLRRTKDEVLADLPPKIIQDRYCDLS
PLQLKLYEKFAFSQAKKNVATMVEAYGGNADDRGNTSAPTHVFQALQYLRKVCSHPVLVL
DGPLSENVNEENGSMDIHDIQNSPKLLALRDILEECGIGQCNGDNSTAGGQHRVLIFAQL
KGFLDIIEKDLFQTHMKSVTYMRLDGSVDVSKRFEIVKAFNSDPTIDVLLLTTHVGGLGL
NLTAADTVVFMEHDWNPMRDLQAMDRSHRLGQRRVVNVHRLIMRGTLEEKVMNLQRFKLS
IANTVINADNASISSMDTGQLLDLFTFDGKKANVPGTSKDKEEEAAGSSGSKGGKGLKSM
LSSLEDLWDQSLYHEEYNLGQFVSRLK
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcagcagcagcagcaatcgtctcggttgaatcggctgctgacgctcctc
gacactggatccacttccgcgacgaggctcactgctgcgaagcagattggcgagattgcg
aagcagcaccccactgaattgcaagctctcctgaaaagagttgggcacttcctccgaagc
aagagctgggaaacgcgtgtggccgccgctcatgcaattggatccatcgccgagaatgtg
agtcatgcctggcgttcagtaggtacatttctccgacatcgtgtttgcgctgcgcctaac
ggtggttttatcgccaggtttgatgttcacaaggttttggagtcgggccggctattgctt
gcatccggtggtcaggaatttgatgtttcgctcgacagtacaaagacttcagtggaaagg
ctggcacaccaaaagcaaaatctgcgtcgccgactgggtaaaagctttacttgtatcttc
gtcgatgttaatgacatgattcgtgacgaggatctcatgatgcagagaacaccagttggc
gatagtagcattcacaatcatgtgtaccagcggcaggaagttcaacaattggttgccaac
atggttccgggtgtccttccaaggacactaagtgcgagagagaagaacatgcttaaacgc
aaagctaaattttttgtcaaagatggatcgaaggaggaagcggagctagaagagcctagt
aacaagcgtcctaaatctgttgtgaatgagcaatcacaacaacaaactgataaggtattc
tatagcgcttcgttgtttctcgtgttagattctgtgctagaggaggacggtcaggacatt
tttgccgacggtcgctggccattttcccgctttgtggaggctctcatgcatgatattttc
gatcctgtctgggaaattcgccatggtagtatcatggcgcttagagaaatattaagctca
caagcagcttctgctgccggcggagacaagatggagctggctgctgcacaagaagcatgg
cgagcaaactcggagtttcttcaagattgcactattcggcttatttgtatcttttctctt
gatcgatttggtgactttgtttcggaccaagtggttgcgcctgtgcgagaaacttgtgct
caagttctgggtgcggtgctcaagcaaatgcattcgccactagttcatgaaactttcagt
atccttcttcagatgcagcggcgttcagagtgggaggtcagacatggcagtttattgggc
atcaagtacctggtggcagtccgacaggaaatgataggtgaacttcttcctcgggtttta
cctgcctgtatagctggacttgaagatcctgatgacgacgtgagatcagttgcagcagac
gctttgtttccagctgcccgcgcaattgtgactcatgcgagtcatctggtaaaaactatc
ctgatcttgctgtgggatattctacttgatctggatgacttgagtccttcgactaacagt
gtaatgcatcttctggctgagctttattcacagcctgaagcgttacttccactgaattct
acctcttcgattgacttgaatgcggacatggctctggacgagcaacaacaggatttggat
gatttatctgtcttagccccccggctttggccttttatgcggcataatatttcatctgtg
agatatgctgctattcgaactctggtacgttcttcgcaagatttctcgggatcgacatgt
tgggctctacgcatccttgacgatatgctgcgcatggtctttcagaatttgcttatggaa
tcaaacgaagaaattctgcagtgttctgggcgcgtctggcgtctattgattcaggtatgt
tcacattcgcatttgcaaccatcgacgctatccttctttccaacgtggctgaagcttgcc
agcaccgcggctggtgcttctttggaagcctcgaatatgttttcgcccacgtctctacca
aaaggaagccgttctaaagtggtggctaagctaagtgcatctaaacttataagccgagga
gagtctcactcgcatggtccagaagcccaaaaacattctgacgtggttccgaaagtagtt
gttggtgctgacggagagaattctgctgtatatatgaggattgccactacatctgccttg
ggagttttggctgggaacgtacctggttcaatgctggaccttatatttcaggctctaaac
caagctttacattcaccctcaggtatccagagacagaagaaggcgccggtgatttctgct
tttcgacctctaacatcatatttacaagtgctccttttacaaattgagccttcgcatccg
actccggactcttctttgccttacgcggaactttcgaggacttacgctaagatgagggcg
gaagttgccgcactcgttaagcatgctgaggcttcgaactttggattaccagtggacttg
caaccagtggaaaacatgtccgtagaagctgctatagacgctgcaatgaagtttattcct
ttggaggaatgcaatggagcagtttccgatgagaaaacttgctccgctcgagacatgatg
gagtctgctcgacagcgtcttcttgctaccgcaggctatctaaaatgtgttcaggttaat
ctgcatggcacagttttggctttgatggctagtgtggtcgtatggatgggcgagctaccg
tcgaagctgaatcctatcatccaacctttgatgggctccgtcaagcgtgaacaggaggaa
gtactgcagcagtgcgcaggagaagctttggcagaagtgattggacactgtgttggtcgg
aaaccgtgtcctaatgacaagcttatcaaaaacctgtctaccatggcatgtgctgatcag
cttgaaactccattggcgactgaagcgaactcgtcctggaccttcgatgatggtgactat
tcattgaaatcttcatcgactgcgttacgaaagatggaagttgcttccattgacgacaaa
gcaaaggttgaaggaataattacgagacgtggtgcagaactggcacttaaggcgctttgc
cagaggtttggtgattctcttttcgaaaagcttccgaggctctgggactgcctaactgaa
gtaatcaagccttccgatcctggtcatattcatgatgcgtttctagtagaaccagttgcc
gatcctcaagcgcttgttaacaacctgcagcttatacgcgttactgctcctttcctaaaa
aatgccatgcaatcgaggatattaacactcctccctgcaatatttggctgcgttcgacat
cgtcatgcggctgtaaggtgtggtgcgtcaagatgtatcacagcgatggcccgaaccttg
aaagagacgatcatgactgctgtcctagcaaaagccatgccaatgcttactgatggtaca
tctatggaggcaagacaaggagcagggatgctggtgacgtttcttgtcgaaggcatggga
atggaactcgtaggatacgctccgtttctcatcgttccgttgctgggctgcatgggtgac
agcaaccaggttgtcaggcaaagcgtgactcacagttttgccgccttggttccacttctt
ccacttgctcgaggggtaccacagccagaaggtatctcctctctaagtaactcagacgat
gccaggtttttggaacaattactggataatagtcgcgtcgacgactataagctggcgttt
gatttaaaaactccgctacgcaggtatcaacaagaaggtatcaactggctagctttctta
aagcgttttaagctccatggtgttttgtgcgatgacatgggtctgggaaagacccttcaa
gcttctgcgattgttgcttcagatatggctgagcgtattgctgctggccaggggaaagag
tcgacgttatctttgatagtatgcccaccaacattagtgggtcactggatatacgagatt
gagaagttcataccggccgaacttctgaaacctttgcagtatgtggggcaacctcaggat
cggttatacttgcgcaatcagttctcggctcacagtattataatcacatcttacgatgtg
cttcgaaaggacatcgagcatctgagccaaatacagtggaacttctgcatcctagatgaa
ggacacatcatcaaaagcgggaagtccaaaatcactctggctgtaaagagaattcaagcc
gagcacagattaattctcagcggtactcctattcagaacaatgtactagaactatggtca
ttgtttgattttcttatgccgggtttccttggaactgaacgccagttccatggtagctat
gggaaaccgttgcaagctgcaagagatccgaaatgttccgcgaaagaagctgaggccggg
gtgttagccatggaggccttgcacaagcaggtcatgccttttctgttgcgccggacaaaa
gatgaagtgctagcggatttacctcccaaaattattcaagaccgttactgtgacttgagt
ccgcttcagctgaaactttatgaaaagtttgccttttctcaagccaagaagaatgtggcc
accatggttgaggcgtacggtggaaatgctgatgaccgaggaaacacgtcagctcctacg
cacgtctttcaggctctgcaatacctgcgaaaagtttgcagtcatcctgttcttgtccta
gacggacctctgtcagagaacgtcaatgaggagaatggcagcatggatatacatgatatt
caaaactcgccaaagcttctggccttgcgagatattctcgaagaatgtggcatcggtcaa
tgcaacggcgataattctactgccgggggacaacatcgtgttttgatctttgcacaacta
aagggttttcttgacattattgaaaaggatttgtttcaaacacacatgaaaagtgtgaca
tacatgaggctcgatggctccgttgacgttagcaagcgttttgagattgtgaaggctttc
aattctgatccaacaatagacgtgcttcttctcactacacatgtgggtggcttgggatta
aaccttacagcagcagacacggttgtatttatggagcatgactggaatcctatgcgtgat
ttacaggctatggacagatctcacaggcttggacaacggcgggtggttaacgtgcataga
ctgataatgcgtggaactttagaggagaaggtcatgaaccttcaacgcttcaagctttcc
attgcgaacacggttatcaatgcggacaacgcgagcattagcagtatggacacaggccag
cttctcgacttgtttacctttgacgggaagaaggctaatgtcccaggtacgagcaaggat
aaggaggaagaggctgcaggatcgagtggctcgaaaggcggcaaaggactcaagtcgatg
ctaagctctttggaggatctctgggaccagtcactataccacgaggagtataatcttggt
cagttcgtctctcgcctcaagtga
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integrated database retrieval system
