Selaginella moellendorffii: SELMODRAFT_187834
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Entry
SELMODRAFT_187834 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
smo04141
Protein processing in endoplasmic reticulum
smo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_187834
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_187834
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_187834
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_187834
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_187834
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_187834
03110 Chaperones and folding catalysts [BR:
smo03110
]
SELMODRAFT_187834
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_187834
03051 Proteasome [BR:
smo03051
]
SELMODRAFT_187834
03029 Mitochondrial biogenesis [BR:
smo03029
]
SELMODRAFT_187834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_187834
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
SELMODRAFT_187834
Spliceosome [BR:
smo03041
]
Complex B
Other components
Prp19 complex
SELMODRAFT_187834
Complex C
Prp19-CDC5 complex
SELMODRAFT_187834
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
SELMODRAFT_187834
Chaperones and folding catalysts [BR:
smo03110
]
Heat shock proteins
HSP70 / DNAK
SELMODRAFT_187834
Membrane trafficking [BR:
smo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
SELMODRAFT_187834
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
SELMODRAFT_187834
Proteasome [BR:
smo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
SELMODRAFT_187834
Mitochondrial biogenesis [BR:
smo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
SELMODRAFT_187834
Exosome [BR:
smo04147
]
Exosomal proteins
Proteins found in most exosomes
SELMODRAFT_187834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DDR
DACNG
Motif
Other DBs
NCBI-GeneID:
9648516
NCBI-ProteinID:
XP_002994402
JGI:
187834
UniProt:
D8RBE2
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MAKEGPAVGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
AMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKVTAGAAEKPMITVTYKGEEKTFAAEE
ISSMVLNKMKEIAEAFLGATVKNAVITVPAYFNDSQRQATKDAGVISGMNVMRIINEPTA
AAIAYGLDKKATSAGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR
MVNHFVQEFKRKYKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFDGIDFNTT
ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSIHDVVLVGGSTRIPKVQQLLQDFFNG
KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR
NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV
CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVSEAEKYKSEDEEHKKKV
EAKNSLENYAYNMRNTIRDDKIAGKLDADDKKKIEDAVEQTIQWLDQNQLGEADEFEDKM
KELESICNPIIARMYQGAGGAPGDMPMPGAGAGGYPGAGGGGAGAGAGAGPKIEEVD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaaggtcccgctgtggggattgatctgggcacgacgtattcttgcgtcggt
gtgtggcagcacgatcgggtggagatcatcgccaatgatcagggaaacaggacgacgccg
tcgtatgtggccttcaccgacacggagcggctgattggcgacgccgccaagaaccaggtc
gcgatgaatcccgtcaacactgtcttcgatgcgaagcgtttgatcggcaggcgattctcg
gactcttcggtccaaagcgacatgaagttgtggccattcaaggtcactgctggtgccgcc
gagaagccgatgatcacggtcacctacaagggcgaggagaagaccttcgcggccgaggag
atctcttccatggtcctgaacaagatgaaggagattgccgaggccttcttgggcgccact
gtgaagaacgcggtcatcacggtgcccgcttacttcaacgattcgcagaggcaggccacc
aaggacgctggtgtcatctctggaatgaacgtcatgaggatcatcaacgagcccaccgcc
gcggccatcgcctacggcctggacaagaaggcgacgagcgctggcgagaagaacgtcctc
atcttcgatctgggtggcgggaccttcgacgtctcgctgctgacgatcgaggagggtatc
ttcgaggtgaaggcgactgccggagatactcacttgggtggtgaggacttcgacaacagg
atggtgaatcacttcgtccaggagttcaagcgcaagtacaagaaggatatcagtggaaat
ccccgggcgctgaggagactgaggaccgcttgcgagcgcgccaagaggactctctcgtcc
actgcgcagacgacaatcgagatcgactcgctcttcgacggcattgacttcaacaccacc
atcacccgcgccaggttcgaggagctcaacatggacctcttcaggaagtgcatggagccg
gtggagaagtgcctgagggacgcgaagatggacaagagcagcatccatgatgttgtgctc
gttggcggctccacccgaatcccgaaggtgcagcagctgctccaggactttttcaacggc
aaggagctgtgcaagagcatcaacccggacgaggcggtggcgtatggggccgcggtccag
gccgccatcctgagcggggaaggcaacgagaaggtccaagacctcctcttgctggacgtg
acgccgctctcgcttgggctggagaccgccggaggtgtgatgacggtgctcatccccagg
aacacgaccatcccgacgaagaaggagcaggtgttctcgacgtactcggacaaccagcct
ggagtgttgatccaggtgtacgagggcgagcggacgaggacccgggacaacaatctgctc
ggcaagttcgaactctctgggattcctcctgcgcctcggggtgtcccgcagatcactgtg
tgcttcgacatcgacgcgaatggcatcctcaacgtgtcggccgaggacaagacgactggg
cagaagaacaagatcaccatcaccaatgacaagggtcggctgagcaaggacgagatcgag
aagatggtgtccgaggccgagaagtacaagtccgaggatgaggagcacaagaagaaggtg
gaggcgaagaactcgttggagaactacgcctacaacatgaggaacaccatccgggatgac
aagatcgctgggaagttggatgctgacgacaagaagaagattgaggacgcggtggagcag
acgattcagtggctggatcagaaccagctgggcgaggcggacgaatttgaggacaagatg
aaggagctggagagcatctgcaaccccataattgcgaggatgtaccagggagctggaggg
gccccgggtgatatgcccatgcccggtgctggagccggcgggtatccgggtgctggaggt
ggtggtgccggggcgggcgccggcgccggtcccaagatcgaggaggttgattaa
DBGET
integrated database retrieval system
