KEGG   Selaginella moellendorffii: SELMODRAFT_230130
Entry
SELMODRAFT_230130 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
smo  Selaginella moellendorffii
Pathway
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_230130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_230130
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_230130
Spliceosome [BR:smo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    SELMODRAFT_230130
 Complex B
    SELMODRAFT_230130
 Complex C
   U2 SnRNP specific factors
    SELMODRAFT_230130
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    SELMODRAFT_230130
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG IFRD CEP104-like_TOG HEAT_Maestro DUF6848 Toxin_trans
Other DBs
NCBI-GeneID: 9662222
NCBI-ProteinID: XP_002962546
JGI: 230130
UniProt: D8QV86
LinkDB
Position
Unknown
AA seq 1156 aa
MEEGRERVALNSVSFDKDLYGDRVDYVRFIGTTQEDSEDDDPGRAVSRPPYTAPKPLLEE
IPGEEPKDEDLGFRKEQPIAAREDDYRRKRLTRLLSPDRNDPFLSGDKTPHPSTRTYTEV
MRDEKLKRDTQETFQQIAKIELEKEKDLAEKRKLEKGKQPAGSKRKREEDSGAVVKKAKG
WDDPDGPSSSAPTTSRRERSRWDDRTPVTKVADQTPVIYTQTPVGGVGLQTPSEGKIMAA
RMTSGLYELLSDEDLDAMLPSEGYKVLEAPASYVPIRTPARKLVATPTPVPGYAIPEEDR
SQEYGVLKETPDGLPMKAEDVQYFGKLLGKEKEEDMSPDEITERKIMKLLLKVKNGTPPQ
RKSAMRQLTDRAREFGAGPLFNQILPLLMSPALEDQERHLLVKVIDRVLYKLDELVRPYV
HKLLVVIEPLLIDEDYYARVEGREIISNLSKAAGLVTMITALRPDLDNTCDYVRNTTARA
FSVVASALGIQSLLPFLKAVCVSKKSWQARHTGIKTVQQIAILMGCAVLPHLTSLVEIVK
HGLDDENQKVKVITALALAALAEGAEPYGIESFDSVMIPLFQGLGKHKGKVLAAFLKAMG
RIVPLMSAEHASFFIKNVMPVAIKQFESPDEEMKKIVLKVVKQCVATDGVEADYVRQEIL
PKFFQYFWKRQMALDRRNYRLVVEATVEIANKVGAADIAEKMEEGLKDSSEEYRKMAVET
IDKVLSQLGASGVDSRMEQLLVDGMIYAFQEQPETSNGTIILNGFGALVHALGSRARPYL
PQVCGMIKWRLGNKSARVRQQAADLIARIAPAMLECQEEQLLAHLGVVLYESLGEEYPEV
LASIIGALKAVVNGIGMTRMTPPIKDLLPRLAPILKNRHEKVQESCIDLVGRIADRGAAF
VPAREWMRICFQLLELLKAHKKSVRRAAVNTFGYVAQAIGPQDVLAALLDNLRVQERQNR
VCTAVAIAIVAETCKPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEVGRDYVYAV
TPLLEDALMDRDLVHRQTAASVVKHLALGVANLGCEDALLHLLNCLWPNVFETSLHVASA
VMEAIEALRVALGPVVILSYCLQGMFHPARKVREVYWRIYNGLYVGSQDCLVAAYPVIED
VGRNVYSTRPELYMFV
NT seq 3471 nt   +upstreamnt  +downstreamnt
atggaggaagggcgagagcgagtggcactgaactctgtaagttttgacaaagatctttat
ggcgatcgggtagattacgttcgtttcataggaacaacgcaagaagacagcgaagacgat
gatccaggaagagctgtgtcgaggcccccatacacagctccaaagcctttactcgaagaa
attccgggcgaggagccgaaagatgaggatctgggcttcaggaaggagcagcctattgct
gcgagggaggacgattaccgaagaaaacgattgacacggcttttgtcgccggatcgaaat
gatccctttctttcgggggacaagactccacacccgagcaccaggacttacacggaggtc
atgcgtgacgagaagctcaagcgggatacgcaagagactttccagcaaatcgcgaagatc
gaactggagaaagaaaaggatctggccgagaaaaggaaactggagaaggggaaacaacca
gctggttctaaacgaaagagagaggaggactcgggtgctgttgtgaagaaggccaaagga
tgggatgatccagatggtccctcgagctcggctccaacaacatcgagaagagagcgttct
cgttgggacgatagaactccggtgacaaaggtggctgatcaaactcccgtgatttacact
cagaccccggtgggaggagtgggcttgcaaactccgagcgaggggaagatcatggcagcg
cggatgacttcggggctttacgaactcttgagcgacgaggacttggatgcgatgctacca
agtgaaggatacaaggtgttggaagctcccgcgagttatgttcctatcagaactcctgcg
aggaagcttgtggcaactccaactccagttcccgggtatgctatccctgaggaggatcgc
agccaggagtatggtgttttgaaggaaactccggatggtttgccgatgaaggccgaggac
gtccagtactttgggaagctcctgggcaaggagaaagaggaagatatgtctccagatgag
atcactgagaggaagatcatgaagctgctactcaaggtgaagaacggcacgcctccgcag
aggaagtcggctatgagacagctgactgacagggctcgggagtttggagctggcccgctt
ttcaaccagatactcccgctgctcatgtctccggcactcgaagatcaagagcgccacctt
ctcgtcaaggtgatcgaccgggttttgtacaaactggacgagctcgtgaggccgtatgtt
cacaagctccttgtcgtgatcgagccgctcctcatcgacgaagactactacgctcgagtc
gagggacgagaaatcatctccaacttgagcaaggcagccgggcttgtaaccatgatcacg
gcgttgaggcctgatctcgacaacacttgcgactacgtgagaaacacaacggcccgtgcg
ttcagcgtggtggcatcggcactcgggatccagtcgctgctcccgtttctaaaggcggtg
tgcgtgagtaagaagtcttggcaggcacggcacacggggatcaagactgtgcagcagatc
gccattctcatgggctgtgccgtgcttccacacctgacttcactcgtggagatcgtcaag
cacggcctggacgatgagaaccaaaaggtgaaggtgatcacggccttggctctggccgct
cttgccgagggtgcagagccttatgggatcgagagcttcgactcggttatgatacctcta
ttccaaggattggggaaacacaaggggaaagttttggccgcttttctcaaggctatgggg
cgtatagtcccactgatgagcgccgagcatgcaagtttcttcatcaagaatgtcatgcct
gtcgcgatcaaacagttcgagtcacccgacgaggagatgaagaagattgttctgaaggtg
gtgaaacagtgtgttgccactgatggtgtggaggctgactacgtccggcaggaaatcctc
cccaagtttttccagtatttctggaagcgacagatggcgctggacaggaggaactacagg
ctggttgtggaggccacggtggagatcgcgaacaaggttggagctgctgatatagctgaa
aagatggaggaaggtttgaaggacagcagcgaggagtacaggaagatggctgtggagacg
atcgataaagtcctgtcgcagctgggagcttccggggtcgacagccgaatggagcagctc
ctggttgacgggatgatatacgcgttccaggagcagccggagacgagcaacggtacgatc
atactcaatggttttggagcactggttcacgcactgggatcgcgagcgaggccttactta
ccacaggtatgcgggatgatcaagtggaggctcggcaacaaatccgccagagttcgtcag
caggcagccgacttgatcgctcgcatcgcgccggccatgctcgagtgccaagaggagcag
ctcctggcacacctcggagtggtcctctacgagtccctcggggaggagtacccggaagtt
ctcgcctccatcatcggagctctcaaagccgtcgtgaatggcatcggcatgacgaggatg
acgcctcccatcaaggacttgctgcctcgccttgctcccatcctcaagaacaggcacgag
aaagtccaggagagctgcatcgatctggtgggacggatcgcggaccgtggcgccgccttc
gtcccggcgagagaatggatgcggatatgtttccagctcctggagctgctcaaggcgcac
aagaagtcggtccggcgagcagcagtgaacactttcggctacgttgctcaagccattggt
cctcaagacgtgctcgcggcgctgcttgacaacctgcgagtccaggagcggcagaaccgg
gtgtgcacggcagtggccatcgccatcgtcgcggagacttgcaagcctttcacggtgctg
ccggcgctcatgaacgagtaccgtgtcccggagctcaacgtccagaacggggtgctcaag
gcgctctcgttcttgttcgagtacatcggcgaggtggggagggactacgtctacgccgtg
acgccgctgctcgaggacgcgctcatggacagggatctggtgcacaggcagacggcggca
tcggtggtgaagcacttggctctcggggtggcgaacttgggctgcgaggacgcgctgctt
catctcttgaattgcctgtggccgaatgtgtttgagacgtcgctgcatgtcgcgagtgcg
gtgatggaggcgatcgaggcgctgagggtggcgttgggacctgtggttatactgagctac
tgcttgcaggggatgttccatccggcaaggaaggtgagggaggtgtactggaggatctac
aatggcttgtatgttgggtcacaggattgtctggtcgctgcttatcctgttattgaggat
gtggggaggaatgtgtacagtactaggcctgaactttatatgtttgtgtga

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