Selaginella moellendorffii: SELMODRAFT_230134
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Entry
SELMODRAFT_230134 CDS
T01496
Symbol
SmABCB1
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_230134 (SmABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_230134 (SmABCB1)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_230134 (SmABCB1)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_230134 (SmABCB1)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_230134 (SmABCB1)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_230134 (SmABCB1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_230134 (SmABCB1)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_230134 (SmABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
DUF87
Zeta_toxin
nSTAND1
RsgA_GTPase
AAA_25
PRK
HUTI_composite_bact
DUF5427
Motif
Other DBs
NCBI-GeneID:
9661167
NCBI-ProteinID:
XP_002962569
JGI:
230134
UniProt:
D8QVC0
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MGTLSNEDLARYIAPCGGGGGGTEREVEVSAENNVSASSEVPVGLELDDSELLFIEELAG
NRDYFDSDEFFRLEYGSSKSCIDVEGRNFKDIDQIEPEDLDFAWKGGRDDSCLEDKDRQP
AGTSKDSIPRVPFYKMYAFADPLDYLLMAIGTLGAVVHGLAVPVYFYFFGRLVDAFGENY
ANPSSMASEVSTYSLYLLYLALVVLGAAWLEVSCWMHSGERQSAKIRIKYLKSILVQDVG
FFDTDMCVGEIVNQISSDILIIQDAISEKAGNLIHFLARFIGGLVAGFVAVWQLALITVA
VVPAIALAGGAYAVSLINTAAKSQKANEEAGKIAEQVIAQVRTVYSFGGEARAAKAYSDA
LQPTLRLGKRAGLVKGLGIGVTYGLVLCAWALLLWYAGVLIRHGMSDAGKAFTTILNIVV
SGFSLGQAFSNFPALAEGRAAASNIIQMVKRRPAMLHNQGGRLEEVYGDIELRNICFSYP
SRPESLVLKDFSLMVPAGKTIAIIGSSGSGKSTVVSLIERFYDPLSGDVLLDGTNIKYLE
LQWLRKQIGLVSQEPILFATTIRENLLYSKEDATMEELIEVSKASNAHEFIDLFPDGYET
QVGERGVQLSGGEKQRVALARAMLKNPKILLLDEATSALDTGSQQLVQDALDRFRVGRTT
VVIAHQLSTIRHANSIAVVHHGRIVEMGTHEELLAKGEKGAYAALSKLQDTGLLSDEFSS
EESCFDLDLSANQAVEEPEGPRPPRPSIWRLMQLNKPEWPYALLGTIGAIISGCEFPLFA
LAITQVLITFYSPDKEFLKKEVSKFSLILTGSTICVVFSHMLQHYSFGAMGESLTKRVRE
MMFLGILNNEISWFDEEDNRCGLVASRLASDATMVRVVIADRMSTIVQNLALMFVAFFIA
YVLEWRVAVVITATFPLLLIALVGELCFSGDLSKAYSRASTVASEAVGNIRTVAAFCSEK
KVIDSFVRELQVPKRKVFLRGHVAGVCYGISQFFLYTSYALGLWYSSVLIKKGVTGFANA
IKTFMVIIITAFGVAETLATAPDLIKGSQALYAVFEIMDRKGQINPNARAMEIGNVKGDV
DFRHVEFSYPARKDVVIFRDLSLRIRAGKSLALVGASGSGKSSVVSLIQRFYDPVSGYIM
IDGKNIRSLNLQSLRRHIGLVQQEPALFSCSIYENILYGKEGASEAEIVQAAKTANAHGF
ISSLPNGYQTQVGERGVQLSGGQKQRVAIARAVLKCPAILLLDEATSALDAHSEKQVQEA
LDRVMRGRTTLIVAHRFSAIRNADIIAVVQDGTVVEQGSPKELLSNRNSAYFQLVKLHAR
HRTSKLEIL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggggacgctctccaacgaagatcttgcgcgatacatagctccttgcggcggcggcggc
ggcggcaccgagcgcgaggtggaggtgagcgccgagaacaatgtgagtgctagctcggag
gttccagtcgggctggagctggacgactcggagctcctcttcatcgaggagctagctggg
aacagggattacttcgactcggatgaattcttccggctggaatacggctccagcaagtcg
tgcatcgatgtcgagggccggaatttcaaggatatcgatcagatcgagccggaggacctg
gattttgcgtggaagggcgggagggatgatagctgcttggaggacaaggataggcagccg
gcaggaacttccaaggactccattcccagagttccattctacaagatgtacgcttttgct
gatcctctcgactatcttctcatggcgattggaacactgggagctgtggtgcatgggctt
gcggtgcccgtgtatttctacttctttgggaggcttgtggacgctttcggggagaactac
gcgaatccatccagtatggcatccgaggtttcaacttactccttgtatttgctctacttg
gcgctggttgttctaggcgcagcttggcttgaggtttcgtgctggatgcactctggtgag
cgtcaatctgccaagatacgcatcaagtacctcaagtcgatcctcgttcaagatgtggga
ttttttgacacggatatgtgtgttggcgagattgtgaaccagatatcaagtgatatactc
atcattcaagatgccatcagtgagaaggctggcaaccttattcactttctagcgagattt
ataggaggtttagttgcaggttttgtggcagtatggcaacttgcacttattacagttgct
gtggttcctgcaattgctcttgctggaggtgcctatgcagtttcacttatcaacactgct
gcaaagagccagaaagctaatgaagaagctggaaagattgcagaacaggtcattgctcaa
gtgaggactgtttattcttttggaggagaagcaagggccgcgaaggcttattcagacgcc
ttgcagccaaccttgaggcttgggaagcgagcaggccttgttaagggccttggaattgga
gtaacttacgggcttgttttatgtgcctgggctttgctgctatggtacgccggggttctt
attcggcatggaatgtctgatgctggaaaggcttttacgactattctcaacatagttgtt
agtggcttttctctcggacaagcgttctcgaactttcctgcccttgcggaaggtcgggca
gcagcttccaacataatacaaatggtgaaaagaaggccggccatgcttcataatcaagga
ggacgacttgaagaagtttatggggacattgagctgcgaaatatttgctttagctatcct
tcccgaccagaatctttggttctaaaagacttttctttgatggtgcctgctggaaagaca
attgcgattatcggtagcagtggctctggcaaaagtaccgtggtttctctcatcgaacgt
ttctatgatccgctttccggtgacgttcttttggatggaacaaacataaaatatttggag
cttcagtggttgagaaaacagattggtcttgtaagtcaggagccgatattgtttgcaacc
actattcgagaaaatctgctctacagcaaagaagatgcaaccatggaggagttaatagaa
gtctctaaagcttcaaacgcacacgaatttattgatctctttcctgacggctacgaaact
caggttggtgagcgaggtgtgcaactttctggcggagaaaaacaaagggtggcactggca
agagcgatgctcaagaatccaaaaatacttcttctggatgaggctacaagtgcactggat
acaggttcgcagcagctggttcaggatgcgcttgatcgatttagagtcggccgaacaacg
gtggtgatcgctcaccagctttcaactatcaggcatgcaaatagtatcgcggttgttcat
cacggaagaatcgttgaaatgggaacgcatgaagagctattagctaaaggggagaaaggt
gcttatgccgcgctctcaaagctgcaggatactggtctactatcggacgagttttcttcc
gaagaaagctgttttgacctggaccttagcgcaaatcaggctgttgaagaaccggaaggg
ccacgtccgcccagaccctcgatctggaggctaatgcaactcaacaaaccggaatggcca
tatgctttactcggtactattggagcaatcatatcaggatgcgagtttccgttgtttgcc
ttggccatcacgcaagttttgattacgttctacagtcctgacaaggaattcctcaagaaa
gaagtcagcaagttctcgctcatattaaccggctccaccatctgtgttgttttcagccac
atgctccagcactattcgtttggagccatgggtgaaagtctgacgaagcgagtgcgagaa
atgatgttcctaggtattctcaacaatgaaatatcctggtttgacgaggaagataacaga
tgtggactagtagcttctcgcctggcatctgatgcgacaatggtccgagtcgttatcgct
gaccgcatgtccactattgttcaaaatctcgccttgatgttcgtggctttcttcattgca
tacgttctggaatggcgcgtggctgttgtcattacagcgacgttcccactgttgctcata
gcgttggttggcgagctatgcttcagtggagacctctcaaaagcatactcgagagccagt
acggtggcgagcgaggccgtcggaaacattcgcacagttgctgccttttgctccgaaaag
aaagtcatcgattctttcgttcgagagctccaggtaccgaagcggaaggtcttcctcaga
ggtcatgtagcgggtgtttgctacggcatctctcagttcttcctttacacctcgtacgcg
ctgggattgtggtacagctccgtgctgatcaagaaaggcgtgacaggttttgcgaacgcc
atcaagacgttcatggtaattataatcactgcattcggggttgccgagactctggccaca
gctccagatttgatcaaaggcagccaggcattatacgcagttttcgagatcatggatcgt
aagggccagataaatccaaacgcgcgagccatggagatcggcaacgtgaaaggcgacgta
gactttaggcacgtcgagttcagctatccagcccgcaaagacgtggttattttccgcgac
ttgagcttgaggatcagagccggaaagagtttggccttggttggagctagcggctcaggc
aagagctccgtggtgtctctcatccagaggttttacgacccggtatccggctacatcatg
atagacggcaagaacatcaggagcctcaaccttcagtctcttcgcaggcacatcggctta
gtccagcaggagccggctctcttttcatgcagcatttacgagaacatcctctatggcaaa
gagggagcctccgaggccgagatcgtgcaggcagcaaagacggccaatgctcacggcttt
atcagcagcttaccaaacggctaccagacgcaagtcggcgagcgaggcgtccagctctcg
ggtggccagaagcagcgagtcgccattgctcgagcggttctcaagtgtcccgcgatcctc
ctcctggacgaggcgacgagtgcgctggatgcacactccgagaagcaggtccaggaggcg
ctggaccgagtgatgcgaggcaggacgacgctcatcgtcgcgcaccgattctcggccatc
cggaacgcggacatcatcgcggtcgtgcaggacggcacggtggtggaacaaggcagcccc
aaggagctcctcagcaacaggaacagtgcttacttccagctcgtcaaactccatgcccgc
caccgcacgagcaagctggaaatcttgtaa
DBGET
integrated database retrieval system
