Selaginella moellendorffii: SELMODRAFT_230688
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Entry
SELMODRAFT_230688 CDS
T01496
Symbol
SmABCB2
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_230688 (SmABCB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_230688 (SmABCB2)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_230688 (SmABCB2)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_230688 (SmABCB2)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_230688 (SmABCB2)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_230688 (SmABCB2)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_230688 (SmABCB2)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_230688 (SmABCB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
nSTAND1
Zeta_toxin
DUF87
RsgA_GTPase
AAA_30
AAA_19
DUF815
Motif
Other DBs
NCBI-GeneID:
9635980
NCBI-ProteinID:
XP_002965566
JGI:
230688
UniProt:
D8R3R8
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MIRDGDCKQDVDDEPVKEQPHATVSYLQLFSFADYLDYVLIFLGTVGASVHGAAIPGFFV
FFGKMIDEFGKDYNNPHKMGHEVSKYSLYFVYLGLVILVAAWLEVSCWTYTGERQSSRMR
THYLKAMLSQDVGFFDTDATTGEIVIGISSDTALVQEAIGPKAGNYVHYMARFFAGFAVG
FTSVWQLTLLTLAVVPAIAVAGGAYAYTMVGLTTKNQKAYARAGEIAEETISQVRTVYSF
VGEEKAQELYSRALETTLKLGKSGGLAKGLGLGATYGLTFGSWALLLWYAGVLVRHGTTN
GGEAFTTILNVVISSLSLGNAAPNLGAFAKGKAAGYNILEMIKRKPAINPNTSDGKTISN
VQGNIEFVDIHFSYPSRPDVTIFQKLCLKIPQGKTVAIVGGSGSGKSTVIALIERFYDPM
HNLVRFSRHQDVAAQMATESNWSCESRAGIICTTIRENILLGKPDASDDEIFEAATVAGA
HAFIQQLPDGYETQVGEKGVQLSGGQKQRVAITRAMVKNPSILLLDEATSALDAASEQSV
QEALDTLMIGRTTVVVAHRLSTVQNADIIAVVQGGKIVETGTHSALMAKGESGAYCELVR
LQEAGKAKTLDGPPSKHSRYELYFLFIWFPTSLFFRLQSDAESQSIIGMEEDQRLSLPKP
SFRRLLKLNAREWPQGVLGAFGAILAGVEMPFFAFGLTQVLVTYYNPDKHYVKKEVEKYV
FFFTGLTILAVLANTLEHYFFGYMGECLTMRVRNMMFSAILKNELGWFEKADNYSSLVSS
QLASDATLVRAAVGDRLSILLQNSALILGGFIIAFVLQWKLTLIVLALFPLLISAHVGEH
LFMKGFGVNLSKVYARASVVAGEAVSNIRTVAAFCGESKVLELFNRQLEGIKKNSFARGQ
VAGLGYGLAQCCLYSSYGLALWYAAKLIKDGDSSFGPVIKCFILLIFTAFGVAETLALAP
DLMRSSRAVGSVFAILDRKTEIDPDEPDSEVITHIRGDIEFKRVNFSYPSRPDVAIFYDL
NLKVRAGSSLALVGASGSGKSSVVALIQRFYDPSAGKVLIDGMDIRRINLKSLRLHIGLV
QQEPALFATSIYENVAYGRDGATESEVVEAAKAGNAHSFISSLPDGYQTQVGERGTQLSG
GQKQRVAIARAVLKNPAILLLDEATSALDAQSEKVVQEALDRLMRGRTTVLVAHRLSTIQ
NAGVIAVVEGGRIVEQGSHRELMAKGDGAYARLVRLQQMKETR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgatacgagatggagattgcaagcaggatgtcgatgacgagccagtcaaagagcagccg
catgccacggtgtcgtaccttcaattgttcagctttgcggactatctcgattatgtgctt
atcttcctgggtaccgtcggtgcctcggtccacggagcagctattcccgggttcttcgtc
ttctttgggaaaatgatcgatgagttcggcaaggattataacaatccacacaagatgggg
cacgaagttagcaagtattctctttatttcgtctacttgggcttggtgatcctggtcgca
gcttggcttgaggtgtcctgttggacttacactggcgaaaggcaatcgtcacgcatgcga
actcactatttaaaagcaatgttgagtcaagatgtcggtttctttgacaccgatgccacc
actggtgaaattgttattgggatatctagtgacacggcacttgtacaagaggcaatcggt
cccaaggctggaaactacgtgcattacatggcgaggttttttgccggtttcgcggtggga
tttacgtctgtatggcagcttacgctattgactttagccgtcgttcctgcaattgctgtt
gccggaggagcttatgcatacacaatggtcgggctaaccaccaaaaatcaaaaggcttac
gccagagcgggggagattgcagaagagactatttctcaagttcgaactgtttactcgttc
gttggcgaagaaaaggctcaggagttgtactcaagggctctagaaacaaccttaaaactc
gggaagagcggtggattggccaaaggacttggacttggagcaacctatggcctcaccttc
ggttcttgggcactactactatggtatgcaggagttttagtcaggcacggtacaacaaat
ggtggcgaagcgtttacgaccatacttaatgttgttatcagcagcctttccttgggaaat
gcagctccgaatctcggcgcttttgccaaaggcaaagctgccggatataatatactggag
atgatcaaacgaaaaccagcaattaatccaaacacttcggacggcaagacaatctcaaat
gtgcaaggaaacattgagtttgtggacatacattttagctatccttcgagaccagacgta
accattttccagaagttatgcctgaagatcccccagggaaagacagtggcgatagtcggt
ggcagtggttccggtaaaagcacggtgatagcgttgatcgagcgattctacgatcctatg
cataatcttgttagattctcacgacatcaagacgttgcagctcaaatggctacggagtca
aattggtcttgtgaatcaagagccggcattatttgcaccactattcgtgaaaacattcta
ctaggaaagcccgatgcaagcgacgacgaaatcttcgaagctgctactgttgctggcgct
catgccttcatccagcaactgcctgatggctacgagactcaggttggcgagaagggtgtg
caactctctggcggacagaagcaaagagttgctatcacaagggccatggtaaagaaccct
tcaatattactgctggacgaggctaccagtgcgctggatgcagcgtctgaacagtcggtg
caagaagctctggacactcttatgatcggaagaacaaccgtcgttgttgcgcaccggctg
tctacagtccagaatgctgatatcattgccgtcgtacagggtgggaaaatagtcgaaact
ggtactcactcggcgctgatggcaaagggggaatcgggagcttattgtgaactcgtgagg
ctgcaagaagcagggaaagcaaagactctagatggccctccgagcaagcattccaggtat
gagttgtacttcctttttatatggttcccaacatccctcttctttaggctacagtccgac
gccgaaagtcaaagcattattggcatggaagaagaccaacggctaagtctaccaaagcct
tctttcaggcgtctcttgaagctgaatgctcgtgaatggcctcagggcgttcttggtgct
tttggggccatactcgctggagtcgagatgccattcttcgctttcggcttgacacaggtc
ctagtcacatactacaatcctgacaagcattacgtgaagaaagaagtcgaaaagtacgtg
tttttcttcaccggtttaaccattcttgcggttctggccaacacacttgaacactacttt
tttggctacatgggagagtgcctcacaatgcgagtacgaaacatgatgttttcagctata
cttaaaaacgaactaggctggttcgagaaagcagacaattacagcagcttagtttcatca
caacttgctagcgatgcaactctcgtccgtgctgccgttggtgacaggctgtccatactg
ctacagaactccgcattaatcctcggtggatttataatcgcttttgtccttcagtggaaa
ctcactttgatagttcttgctctctttccacttcttattagtgcccatgtcggtgagcat
ttgttcatgaaaggtttcggagtaaacctgagcaaagtctacgcccgtgcatccgtggta
gctggtgaagctgttagcaacatcaggactgtggcagcattttgtggagagagcaaggtc
ttggagcttttcaaccggcaactcgaggggataaaaaagaactcctttgctaggggacaa
gtagcaggattgggatatgggctagcgcagtgctgcttatatagttcttacgggctcgca
ctctggtacgcggcaaagctgatcaaggatggcgactcttcctttgggccagtgataaag
tgcttcatcctcctcattttcacggcgtttggagtcgctgaaactctggccttggccccg
gacctgatgcgaagctctcgagcagtcggttcggttttcgcaatcctggacaggaaaaca
gagatcgatccggacgagcccgactcagaagtcatcacgcacattcgcggtgatatagaa
ttcaagcgcgtcaacttcagctatccttctcgccccgacgtggcaatcttctacgacctc
aacctcaaagtccgcgctggaagtagcctcgcacttgttggagcaagcggctccggaaag
agctccgtcgtcgcactgatccagagattctacgacccctcggcaggcaaagtattgatc
gacgggatggacatccggaggatcaacctcaagtcgctgcggcttcacatcgggctggtc
cagcaggagcctgcgctgtttgcgacgagcatctacgagaacgtcgcatacgggagagat
ggagcaacggagtcggaggtggtggaggctgccaaggctggaaacgctcacagcttcatc
agcagcctcccggatggataccagactcaggttggcgaaagagggacgcagctttctgga
ggacagaagcagcgagtagcgattgctcgcgcggtgctcaagaacccggccattcttcta
ctggacgaggcgacgagtgctctggacgcgcagtcagaaaaagtggtacaggaggcgctg
gacaggctgatgcgcgggaggacgactgttttggtagcgcacaggctatcgacgatacag
aacgcgggcgtgattgcggtggtagagggtggtcgaatcgtggagcagggaagtcatagg
gagctcatggccaagggcgatggtgcctacgcgagactggttaggctgcaacaaatgaaa
gaaacgagatga
DBGET
integrated database retrieval system
