Selaginella moellendorffii: SELMODRAFT_230720
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Entry
SELMODRAFT_230720 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_230720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_230720
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SELMODRAFT_230720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
cobW
YdfZ
Zn_ribbon_RanBP
GBP
AAA_22
Motif
Other DBs
NCBI-GeneID:
9652039
NCBI-ProteinID:
XP_002966019
JGI:
230720
UniProt:
D8R4C2
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MMTTTMTTRRKITPTAAQPQLRVSDSSTSAGFISRSLPGTAPQQPIWACPICTYDNLEEH
QSCEMCGVVRDSPAPIHASGSVPFKFDGPSPDDAILGAVQGSKKPVQGNSHARAKSKAAA
PTSDSPGNQSKLSDKEHGVSEKLKKSLVLDGDSEDVKESSKQRLQSTSNKGLPLESYKPE
PWMMHQGSKTAEKSLLNLVVVGHVDAGKSTLMGRILHSLGRVSQKEMHKNTKEANEMGKG
SFAYAWALDEGVEERARGVTITVAVAHFETAKLRVVLLDAPGHKDFVPNMISGASQADAA
VLVVDAAEGGFEAGMGAEGRESGQTREHAQLVRSLGVSQLVVAVNKMDEVQYSQERFEEI
KRILTPFLRHCGFRDSSVSYVPVSAIAGENLVSTPSDDLFRAWYTGKDGTLLDALNRLEP
PERDIAKPFRLAVAEVVRSRSLGSAAAGGKVESGAIKIGSKVMVMPSREVGVVKNLEQDG
KALQTARAGDGVDIGLQGVDAGVIVPGGVLCHPDYPVPIATRFELRILTLKLAFPMLPGA
QVVVHAHHAKEPGTVTNLTALIDAKTGQAVKRSPRCLTSNQSALVEVAPERGLCVQEYIK
FRGLGRVVLRSEGRTLAVGIITRIISYQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgatgactactacgatgactacgaggaggaagattacgccgacagcagctcagcctcag
ctccgggtaagcgattcatcgacgagcgcgggatttatctccagatctcttccaggaaca
gcgccgcagcaaccaatctgggcttgccccatctgtacatacgataatctggaggaacat
cagtcgtgtgagatgtgtggagtggtgcgagactctccagctccaattcacgcttccggc
tcagtgcccttcaagtttgacggaccttctccagatgatgcaatactcggagcagtacaa
ggaagcaaaaagcccgtgcaaggtaacagccatgcaagagcaaagtccaaagcagcagcg
cctacttcggattcacctggaaaccagagcaagctgagcgacaaggagcacggcgtatcc
gaaaagctgaaaaagagcctggtccttgacggtgatagcgaagacgtcaaagaaagctca
aagcaacggttgcagtctacgagtaacaaggggttgccgctggaaagctacaagcccgag
ccatggatgatgcaccaaggatcaaaaactgcggagaagagcttgttaaaccttgtagtg
gttggacatgttgatgctggcaagtccacattgatgggaagaatcctgcatagcctggga
cgagtttctcaaaaggaaatgcacaaaaacacaaaggaggctaacgagatgggaaaaggt
tcttttgcgtacgcttgggcgcttgacgagggcgtcgaggagagggcacggggtgttact
ataacggttgccgtggctcacttcgagacagctaaactacgtgtcgtactgttggacgcc
cccggccacaaggacttcgtgcctaacatgatttctggagcttcgcaagctgatgctgct
gttcttgttgttgacgccgcggaaggtggctttgaagctggaatgggagcagaaggccgc
gagagtggccagacaagagagcatgctcaattagttcggagccttggagtcagccagctt
gttgtagctgtgaacaagatggatgaggtgcagtattcgcaagagaggtttgaagagatc
aagcgcatccttactccgtttttacgacattgtggatttcgggactcgagcgtgtcctac
gttcctgtcagtgcaatcgctggagagaacctggtctcaactccgagtgatgacttgttt
cgagcgtggtacacaggcaaagacggcacgctccttgacgctctaaacaggcttgagcct
ccggagagagacatcgccaagcctttcagactggctgtagctgaagtcgtaagatcacgt
tcccttggttctgctgctgcgggtgggaaagtcgagagtggagccataaaaattgggagc
aaggtaatggtaatgccttcaagggaggtgggggttgtcaaaaatctagagcaggacggg
aaagccctgcaaacagcaagagccggtgatggcgtggatattggtctacagggagttgat
gccggtgtgatagtccccgggggagttctatgccatcccgattacccggtcccgattgcc
acgcgtttcgaactgagaatcctgacactgaaactcgcgttcccgatgcttcccggtgcc
caggtggttgtgcatgcacatcatgcaaaggagccaggtactgtcacgaatctaacggct
ttgatcgatgcaaaaactggccaagccgtcaagcggtccccacgttgcttgacgtctaac
caaagcgcgttggtcgaggtggcaccggagcggggattatgtgttcaagagtatataaag
tttcgtggccttggacgagttgttttgcggagcgaagggcggacactggcggtgggaatc
atcacgcggatcatctcctatcaatag
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