Selaginella moellendorffii: SELMODRAFT_232189
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Entry
SELMODRAFT_232189 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_232189
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_232189
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_232189
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SELMODRAFT_232189
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SELMODRAFT_232189
microRNA pathway
RISC loading complex
SELMODRAFT_232189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9643038
NCBI-ProteinID:
XP_002974036
JGI:
232189
UniProt:
D8RS27
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MGAPPRPQVPRGGGREGGGNGNGGRYGRGRAGRGFPPHEPGHQASTSSVVASQQSQAYSV
PYGMAPYYSVPPPIHFGQIAQFPGIPYGQAPPQAPPYGRTGVTMPLAGPSTSLIEEKLGS
LQVQPPEEPPRTLVSSKALGFPRRPGKGVMGSKCVVKANHFFAELPDKDLHQYDVTITPE
VTSRGVNRAVMELLVKLNREALGRRLPAYDGRKSLYTAGPLPFQYKDFQVTLPDEEDGTN
APRRERSFKIVIKFAARADLHHLGEFLAGRQPNAPQEALQVLDIWSPISHRGIRLLDDHF
IPLILDGDSHSGMAWKVGAGFTKVSGRRRWDYRLTSLDLLTDMSSTAFIEPLPVVDFVGQ
LLGKDLSRPLSDADRIKIKKALRGVKVEVTHRGTMRRKYRISGLTSQPTQELTFPVDERG
TLKSVVEYFRETYGYTIRSPSLPCLAVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQINN
LLKVTCQRPKDRENDILQTVRHNAYHDDPYAQEFGIRISDKLASVEARILPAPRLKYHDT
GREKDCLPQVGQWNMMNKKMVNGGSVNYWACINFSRGVQDSIAHDFCAELALMCQISGMA
FTPEPIVPVQPARPDQVERALKMLCGEVQSKAKGKELELLIAILPDSNGALYGDLKRICE
TDLGLISQCCLTKHVYKMTKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDIPTIIF
GADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWTDPQSKT
IMHGLLKNEVYRELLLAFHKATGRKPLRIIFYRQRWSERRPACASLEGNYQPPVTFVVVQ
KRHHTRLFANNHNDRESRDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYH
VLWDENTFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGS
LTSGAGPGKSTTTGSSGSRSGRTGVRPLPPVKDNVKSVMFYC
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgggagctcctccgaggcctcaggtcccgcgaggaggagggcgagaaggcggcgggaat
ggaaacggtggaagatatggaaggggtcgcgctggaaggggctttcctcctcacgagccc
ggccatcaggcttctacatcgtcggtggtggcttctcagcagtctcaagcttactcagtc
ccttacgggatggctccttactacagcgttcctcctccaattcattttggtcagatagcg
caatttcctggaataccatacggccaggcgcctcctcaagctcctccgtatggccgcacc
ggcgtgacaatgccgttggctgggccttctacgagtctcatcgaggagaagctggggagc
ttgcaagtccagccgccggaagagcctcctcgcactcttgtatccagcaaagctctcggt
ttccctcgaaggccaggcaaaggtgtgatgggctccaagtgcgtggtgaaggcgaatcac
ttctttgctgagcttcctgacaaggatcttcatcaatatgatgtcacaatcactcccgag
gttacatcgcgaggggtgaatagagcggtcatggagctgctcgtgaagctcaacagggag
gctctgggtcgcagacttcctgcttatgatggaaggaagagcttgtacactgctggtcca
cttccttttcagtataaagatttccaggtgaccctccctgacgaagaggacggaacaaat
gcgccaaggagggagagatccttcaagattgttataaaattcgcggcacgcgcggacttg
caccatctgggagagtttctggccggaaggcagcccaatgcaccccaggaagctctccaa
gttctcgacatctggtctcccatcagtcaccgtggtattcgcctgttggacgatcatttt
attcccctgatcttggacggcgacagccactcggggatggcctggaaagttggcgcgggt
tttaccaaagtatcaggccgacgcagatgggattatcgcttaacatcgctagatctcttg
acagatatgtcgtcaactgcattcattgagcccttgccggtagtggattttgttggacag
cttttggggaaggatctcagtagacctctctcggacgctgatcgcattaagatcaaaaag
gcattgcggggagtgaaggttgaggttacccaccgaggtacaatgcggcggaagtacagg
atatctggcttgacctcgcagccaacgcaagaactcacgtttcctgtcgacgaaagagga
actttgaagtcagtggtcgagtattttcgcgaaacctatggctatactatacgcagtcca
tctttgccttgtcttgccgttggtaaccaacaaagaccaaactacctaccgatggaggtt
tgcaaaattgtcgaaggtcagcgctactcgaagagactgaacgaacggcagattaataac
cttttgaaggtcacatgccagcgtcccaaggaccgtgagaacgatattcttcagactgtc
cgccacaacgcttatcacgacgatccttatgcgcaagaatttggcatccgcattagcgat
aagctagcttcggtggaagcccggatactaccggcaccacggttgaagtatcatgatact
ggacgggagaaagactgccttcctcaagttgggcagtggaatatgatgaacaagaaaatg
gtgaacggaggaagtgtcaactattgggcgtgcataaacttctctcggggagtccaggat
tccattgcacacgatttctgtgctgagttagctctcatgtgtcagatttctggcatggcg
tttactccggaacccattgttcccgtgcaacctgcaaggccagatcaagtggagcgtgcg
ctgaaaatgctttgtggggaagttcaatcaaaagctaaagggaaagagttggaattactc
attgcaatcttaccggatagcaatggtgctttgtatggggatctgaagagaatatgtgaa
acggatcttgggctgatatcgcagtgttgcttaactaagcacgtctataaaatgaccaag
caatatctggctaacgttgctctgaaaatcaacgtcaaggttggtgggagaaacacagtt
cttgtagatgcgctttcgaggagaataccgcttgtcagtgacattccgacgatcatattt
ggtgcggatgtcactcatcctcaccctggagaggattcgagtccatcgatagctgcggtt
gttgcatcgcaagattggcccgaggtgacgaagtatgcgggattagtttgtgctcaagca
catcgtcaagaactgatacaagatctctacaagacctggacagatccacaaagcaaaact
ataatgcacggacttcttaaaaatgaggtgtacagggagctgttgctagccttccacaaa
gcgacgggaagaaagccgctgaggatcattttttataggcaaagatggagtgagcgaagg
ccagcgtgtgcatctttggaaggaaactatcaacctccggtgactttcgtagtggtccaa
aagcgacatcacacacggttgtttgcaaacaatcacaacgatagggagtcaagagacaag
agcggcaatatccttccaggtactgtggtggatacgaagatctgtcatcccacggaattt
gatttctacctctgcagtcacgctggaatacagggaactagtcggccggcacattatcat
gtgctttgggatgaaaacactttcacggctgatggtttgcagtcattaacgaacaaccta
tgctacacatacgcgcgctgcacgagatctgtgtcaatagtgcctccagcatactacgcc
cacttggctgcattcagagcaaggttttatatggagccagagacatcggacagcggatct
ctgactagtggagccggacctgggaagagtaccacgactggcagctcgggatcacgcagc
ggacgcactggtgtccggccactgccgcctgtcaaggataacgtgaaaagcgttatgttc
tactgctga
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integrated database retrieval system
