Selaginella moellendorffii: SELMODRAFT_233365
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Entry
SELMODRAFT_233365 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
smo
Selaginella moellendorffii
Pathway
smo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_233365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_233365
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SELMODRAFT_233365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
9634815
NCBI-ProteinID:
XP_002979580
JGI:
233365
UniProt:
D8S862
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MADDVEVDAFKRLYPAQFLERYLDASVRPDGRPLTRSRPTSVSFNAVSSADGSALVKIGN
TTMLAGAKLETMEPAADTPDQGCLSVDFVMPPICSPRVRPGRPAEEAYVITEQLQNALLS
SGVVDLRELSIVSGKAAWMIYLDVYCLDADGSLLDAALLASVAALAHLQVPAICVRSEGK
ITKAPPDAQASSDGIEFTQPRRLNLGEFPFALTVAMNQKSLIADPTAEEEAILDTKMIVI
LNSSQKIIALHKAGGSTTASTATIQDCLALAMRRRKTLQKVLEEALQKSTK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtcgaggtggatgcgttcaagcgcctgtatcccgcgcagtttctcgag
cgctacctggatgcgtcggtgcggccggatgggaggccgctcacgcgatcgcgcccgacg
tcggtgtcgttcaacgctgtgtcgtcggcggacggatcggcgcttgtcaagattggaaac
acgacaatgctggctggagcgaagctagagacgatggagccggctgctgatacacccgat
caaggctgcctgtctgtagatttcgtaatgccaccgatttgctcgcctcgagtgaggcca
ggaaggccagcagaggaggcatatgtcataaccgagcagctgcaaaatgccctcttgagc
tccggtgttgtcgatttacgtgagctctcgatcgtcagtggtaaagccgcttggatgatc
tatctggacgtttattgcttagacgccgatggatcacttcttgacgcagcactgctcgcg
tcagtagctgctctagcgcatttacaggtacccgcgatctgtgtaagaagcgagggaaag
atcacgaaggctcctccagatgcccaagcaagctccgatgggatcgagtttactcaaccg
cgacgcctcaacctcggtgaatttccattcgcgctgacagtagccatgaaccaaaagtcc
ttgatcgcggatcccacagccgaggaggaagccattttagacactaagatgatcgtgatc
ctcaactcttcccagaaaatcatcgctctccacaaggctggtggatcgaccactgcttct
acagcaacaatccaggattgtcttgcgctcgcgatgagaagaagaaaaacgctgcaaaaa
gttttggaagaggctctccaaaagagcaccaaatag
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integrated database retrieval system
