Selaginella moellendorffii: SELMODRAFT_233433
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Entry
SELMODRAFT_233433 CDS
T01496
Symbol
SmABCB15
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_233433 (SmABCB15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_233433 (SmABCB15)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_233433 (SmABCB15)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_233433 (SmABCB15)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_233433 (SmABCB15)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_233433 (SmABCB15)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_233433 (SmABCB15)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_233433 (SmABCB15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_21
AAA_22
AAA_16
AAA_15
Zeta_toxin
RsgA_GTPase
DUF87
AAA_25
MMR_HSR1
TrkA_N
Motif
Other DBs
NCBI-GeneID:
9635549
NCBI-ProteinID:
XP_002979856
JGI:
233433
UniProt:
D8S905
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MGPERSVSYISLFRFADAKDFVLIAAGTLGAVVNGLTFPAMLIIRGRMIDNFGTLPQDGA
MSTKFSQDALLFVYIAIVAWIASYIEVSCWMFTGERQASRLRALYLRSVLRQNVSFLDNE
LSATYIVNCVSDDTLLVQEAISEKTGNFIRNVVQFVGGYLVGFTQSWKLAIAILPFTPLL
ILPGVFYGSAILKFENEKQATYSKAGNMAEQTIACIRTVYSLVAETKSLRAYSLALEETV
ASGLKQGLIKGLVLGSNGISFVLWAFMAWFGSVLVMHGEANGAEIITTGLALLNGGRALG
FAMSNLGVFVEGRMAAWRMFHIIRRIPPIDVDKSDGKAMQSVQGHIRLEEVVYGYQTRAD
TPVLTSFTLDIPAGKTTALVGRSGSGKSTVISLLERFYDPSAGRILFDGVDIKELDLNWY
RHQIGLVSQEPALFATTIRENILYGKEDASDDEVYRAAHTANAHSFIVRLPEGYDNLVGE
RGLKMSGGEKQRIALARAIIKEPRILLLDEPTSALDMKSETAVLAALEKARLGRTTLIVA
HRISTIRNADAVAVLESGRIVETGRHEELMAVGKAYRALVSLETPRSALLGGEDAVHASP
ENAQSSHSAPIIAAQNGQDSVLYPSRRIRPSFFQLLSLATPEWKQGVLGLAGALGFGVVH
PMYAFLLGCMVSVYYLNDHEEMRKRINLYCVIFPAMMAASFLVNLEQHCNLAAVGEHLSK
RLREAMLAAILKFDVGWFDRDENSSSAVCTRLSYDANVIRALITDRISLLVQTGSAVIVS
FTIGLVVNWRLGILMIGTQPLFVFCYYIKLVCLKGFTHKSAKAHTEASQLACEAISQHRT
ITAFCSQGRVLAMLQSRLDASVTDLKKRSHTAGLGLGVAHFVLYASWGLQFWYAGVLVSK
RKISYQDVFKIFFVFLSTGRVVAEALGLTPDLAKGAASIDSVFGILCQKGKINANDPEAT
PPGKVTGEIEACNVFFAYPTRPDVVVLRGLNLHVPGGTSMALVGHSGSGKSTVVALIERF
YDPLSGVVKIDGKDIKKLELYSLRRQIGLVSQEPCLFSATIHENIAYGRESECTEAEVIQ
ASRIANAHNFISALPEGYKTHSGRKGIRLSGGQKQRIAIARAVLKSPQILLLDEATSALD
LESEHLVQDALETMAGRTTLVIAHRLSTVRNCDCISVMHSGAVVEQGTHEELMSMSGTYF
SLVHLQEAGCSGTKCS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggggccggagcggtcggtgtcctacatttcgctgttccggttcgcggatgccaaagat
tttgtgctgattgcggctggcacgctcggcgccgtcgtcaatggcctcactttccctgcg
atgctcatcattcgcggccgcatgatcgacaactttggtactttgccacaggacggcgcg
atgagcacgaagttctcccaggacgcgcttctttttgtttatattgccattgttgcgtgg
atcgcgtcatacattgaagtaagctgctggatgtttactggcgagaggcaagcgtcgagg
ctgagagcactgtatctcagatctgtgctccgccagaacgtttcttttcttgacaacgag
ctttcagcaacttacattgtcaactgcgtatcggacgatacgctcctggtgcaagaggca
attagcgagaagactggcaacttcatccggaacgttgtccagtttgtgggaggatatttg
gttggatttacgcagtcttggaagctggcaatcgctatactgcctttcacgccgctgctc
attctgccaggggtgttttacgggagcgccatcttgaagtttgagaatgagaagcaggcc
acgtacagtaaagcagggaacatggcggagcaaacgatcgcgtgcattcgtactgtgtac
tcacttgtcgcggagaccaagtcccttcgagcttattctcttgctctcgaggaaaccgtt
gcatctggtttaaagcagggacttatcaaggggctggtactcggttccaacggcatcagc
ttcgttttatgggccttcatggcctggtttggaagtgtgcttgtcatgcacggcgaagct
aatggtgctgagattatcactaccggtttggctctgcttaacggaggaagagctcttggt
tttgccatgtccaatcttggcgtttttgttgaaggacgcatggcggcatggagaatgttt
cacatcattaggcggattccacccatcgacgtcgataaatctgacgggaaagcaatgcaa
tctgttcaagggcacatcagactggaggaagtggtatacggctatcagacaagagctgac
acacccgttcttaccagtttcacactggacatacccgccggtaaaaccaccgctttagtt
ggcagaagtggctccggaaaatctactgttatttctctgctggaacggttttacgatcct
tcagctggtagaattctttttgatggagtagacattaaggagcttgacctcaattggtat
cggcaccagattggtcttgtgagccaggagcccgcgttgtttgcgacaacaataagggaa
aacatattatacggaaaggaagatgccagcgatgacgaggtctacagagctgctcacaca
gcaaatgcacatagttttattgtcaggcttcccgaaggctacgacaatctggttggcgaa
cgaggactaaaaatgtccggaggtgaaaagcaaagaattgccttagccagggcgataata
aaggaaccacgtatccttctgctggatgagcctaccagtgctttagacatgaagtcagaa
acagcagttctggctgctttagagaaggcaaggcttggacgcacgacgcttatagtcgcg
cacaggatttctacgatccggaacgcagatgcagttgctgttttagagtcgggaaggata
gtagagactggaagacacgaagagttaatggcagtggggaaggcgtacagggctcttgtt
tctttggaaacgcctcgcagtgctctgctaggcggagaagatgcggtgcatgcaagtcct
gagaatgcacagtcgtcacattcagcaccaattatcgcagcccagaatggtcaagattca
gttctttatccctcaaggcggatcaggccatcgtttttccagcttttgagtttagcaaca
ccggaatggaagcagggagtgttgggactcgccggtgctcttggttttggcgttgtgcat
ccaatgtacgcctttttgctgggatgcatggtttccgtatactacctgaacgatcacgaa
gagatgcggaaacggatcaacctctactgcgtcatctttcctgcgatgatggctgcgtcc
tttctcgtgaacctcgagcagcactgtaacctggcagctgttggcgagcatttgtcaaag
aggctgcgtgaggcgatgctggcggcgatcctgaagttcgacgttggatggttcgacagg
gatgaaaacagcagcagtgcagtttgtacacgcttgtcctacgacgcaaacgtgattcga
gctcttatcaccgaccgtatctcactcctcgttcagacgggtagcgcagtaattgtgagt
ttcaccatcggactggttgttaactggaggctgggaatactcatgatcgggactcaacct
ctgttcgtcttctgctactacatcaaactggtatgtctgaaaggctttacgcacaagtct
gcaaaggcacacaccgaggcaagccagttagcttgcgaagcgataagtcagcacaggaca
atcacagctttttgttctcaaggcagagttctggcaatgctccaatccaggctagatgcg
tcggttacagatctgaagaagcggtctcacactgctggattgggcctgggagttgcacac
ttcgttttgtacgcatcatggggccttcagttctggtatgcgggcgtgcttgtcagcaag
agaaagatcagctatcaggacgtgttcaagatatttttcgtgttcctgagcacgggacgt
gtggtggcagaggcacttggcctgacgcccgacctcgccaaaggtgctgccagcattgat
tcggtatttgggatcctctgtcagaagggaaagataaatgcgaacgatccagaagctact
cctccggggaaagttacgggagagatcgaagcatgcaacgtgttcttcgcttatccaaca
agaccggacgttgtagttctgagaggcttgaatctacacgttccaggtggtacttctatg
gcactggttggtcacagtggctcggggaagtccacggtcgtcgcgctcatcgagaggttc
tacgaccctctaagcggcgtggtgaaaatcgatgggaaggacatcaaaaagcttgaactt
tactcgctgaggagacagatcggtcttgtgagccaggagccatgcttgttttcggcaacc
atacatgaaaacatcgcttatggacgtgaaagcgaatgcaccgaagcggaagtaatccaa
gccagtcgcattgctaatgcacacaatttcatcagtgcactgccggaggggtataagacg
cattctggccggaagggaatccgtctctctggcggtcagaagcagcgaattgcaatagct
cgagcggtcttgaagagcccacagattttactgctggacgaagccaccagtgctttggat
ctagagtcggagcacctcgttcaggatgcgctggagacaatggccggaagaacgacgctc
gtgatcgctcacaggctctctacggttaggaactgcgactgcatctcggtaatgcacagt
ggagctgtggtcgagcagggaacacatgaggaactaatgtcgatgtctggtacgtatttt
tctctagttcatttgcaagaagctggctgcagtggcacaaagtgctcctaa
DBGET
integrated database retrieval system
