KEGG   Selaginella moellendorffii: SELMODRAFT_233652
Entry
SELMODRAFT_233652 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
smo  Selaginella moellendorffii
Pathway
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_233652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_233652
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_233652
Spliceosome [BR:smo03041]
 Complex B
  Other components
   Prp19 complex
    SELMODRAFT_233652
 Complex C
   Prp19-CDC5 complex
    SELMODRAFT_233652
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    SELMODRAFT_233652
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect RE_HaeIII
Other DBs
NCBI-GeneID: 9657935
NCBI-ProteinID: XP_002981160
JGI: 233652
UniProt: D8SCJ0
LinkDB
Position
Unknown
AA seq 789 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPAQCLERYEKLLDAACYKDESYEPADDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LAALQKRRELKAAGIGSRLRKRKFKGIDYNEEIPFEKRPPPGFYDVSNEERSVAQPRFPT
NIEELEGRRRSDIEAQLRKQDAARNKIAQRQDAPSAIMQISKLNDPEAVRKRTKLMLPAL
QISDRELEEIVKMSSSADNLPGEDEGSSATRALVANYNQTPRAGMTPARTPQRTPGGKGD
AIMMEAENLLRLRETQTPLFGGENPELHPSDFSGVTPKKREVQTPNVIATPLTTPGGVGS
TPRIGSTPRETSFAMTPKGTPIRDEFHINEGLELAADNPKAEKLRQAEARRNLQASLKGL
PNAKNLYQISVLGVPTEQEEADEEMEADMADVIANAQAEEDAREAAVLRKRSKVLQRGLP
RPPPATVELIRNTIPRHAEAGDPKALIQKELVALLEHDNAKYPMSDKSGKSPPVIPELED
LDEQELKEAAREIEEEITLVRASLGHEGADYTAVRDALADDLTYFPQKNVYERATLASTA
ERLTAAQYEFEAVKKHIDGHTKKALKLEQKISVLTGGYKTRGDGLWQQIEAAFKEAETLG
TELQCYRSLHQQEQLIAPRRIEAFQEEVKRQSEKESVLQMRYERRLSCRNDLRRLVAEHD
ARVKSDPTV
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgaggatcatgatcaaaggcggggtgtggaagaacacggaggatgagatcctcaaagcc
gcggtgatgaaatatggcaagaatcagtgggctagaatctcctctctactcgtcaggaag
tccgccaagcagtgcaaggctcgctggtacgagtggctggatccatcgatcaagaagacg
gaatggacccgcgaggaagacgagaagctccttcacctcgccaagctcatgccaacgcaa
tggagaacgatcgctcccatcgttgggagaactcctgctcagtgtctcgaaaggtatgag
aagctgctcgatgcggcgtgctacaaggacgagagctacgagccggctgatgatcctcgc
aagctccggccgggtgagatcgatcccaatccagagtccaagcccgctaggcccgatcca
gtcgacatggacgaggacgaaaaggagatgctttccgaggcaagggcgaggctggcaaac
actcgcggtaagaaggcgaagaggaaagccagggagaagcagctggaggaggcaaggagg
ctggcggcgctacaaaagaggagagagctcaaagcggccggcattgggtctcgtctccgc
aagaggaagttcaaaggcatcgactacaatgaggagattcctttcgagaagagaccccct
ccgggcttttacgacgtctccaacgaagagaggtctgtagcgcagccgcgtttcccgacc
aacatcgaagagctggaagggaggaggcggtcggacatcgaggcgcagcttcgcaagcag
gacgctgctcggaacaagatcgctcagaggcaggacgctccatcggcaatcatgcaaatt
agcaagctcaacgatccggaggctgtgaggaagaggaccaagttgatgctaccggcgctg
cagatttccgacagggagctcgaggagattgtcaagatgagctcctcggcggacaatcta
cctggagaggacgaagggagcagcgctactcgagcacttgtcgccaactacaatcagact
cctcgagcagggatgactccggcgaggactcctcagagaactccgggtggaaaaggcgac
gccatcatgatggaggcggagaatcttctcaggctgagggagacgcaaactcctctcttt
ggtggtgagaacccggagcttcatccgtccgacttttcgggggtgacgccgaagaaacgg
gaggtccagactccaaatgtgattgctacacctctcacgacgccgggaggagtaggatcg
actcctcgaatcggaagtactcccagggagacgtcttttgcaatgacacccaagggaaca
ccgatacgggacgagttccacatcaacgagggattggaactcgcagctgacaatcccaag
gccgagaagttgaggcaggcagaagcgagaaggaacctgcaggcgtcgctcaagggattg
cctaacgcgaagaacttgtaccagattagcgttctcggcgttcctacggagcaagaagaa
gccgacgaggagatggaggccgacatggctgacgtgattgcaaatgctcaagccgaagag
gacgctcgagaagctgctgtcctccggaagaggagtaaagtcttgcagcgaggattgcca
aggccaccgccagcaacggtggagctgataaggaacactatccctcggcacgcggaagcg
ggtgatccaaaggcgcttatccagaaggagctagtcgccttgttggagcacgacaacgcg
aaataccccatgtcggacaagtctggcaagtctccgcctgtgatacccgagctggaggac
ttggacgaacaagagttgaaggaggctgcgcgggaaatagaagaggaaatcacgctcgtg
agggcttctctcggtcacgaaggcgctgactacactgctgtccgagatgctttagctgat
gacttgacttacttccctcagaagaacgtctacgagcgtgcgactctcgcaagcacagcc
gagcggctgaccgcggcacaatacgagtttgaggccgtgaagaagcacatagatggtcac
acgaagaaggctctaaagctggagcaaaagatctctgtcctaaccggaggctacaagacg
aggggcgatgggctgtggcagcagatcgaggcggctttcaaggaggcggagacgctgggc
acggagctgcagtgctatcgatcgctgcaccagcaagagcagcttatcgctccccgccgg
atcgaggcgttccaagaggaggtgaagaggcagagcgagaaggagagcgtcctccagatg
agatacgagcggcgcttgtcttgcaggaacgatctgaggcgactggttgccgagcacgat
gctcgagttaaatctgatccaacagtgtaa

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