Selaginella moellendorffii: SELMODRAFT_235294
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Entry
SELMODRAFT_235294 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_235294
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_235294
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_235294
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_235294
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_235294
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
SELMODRAFT_235294
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
SELMODRAFT_235294
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SELMODRAFT_235294
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SELMODRAFT_235294
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SELMODRAFT_235294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
9630262
NCBI-ProteinID:
XP_002987489
JGI:
235294
UniProt:
D8SVX0
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MSDHQSSFVDDIITRLIEVRNGRPACQVQLAESEIRKLCLCAKEIFLSQPNLLELEGPVT
ICGDIHGQYWDLLTIFQDGGFPPLTNYLFLGNYVDLGKQSIETICLLLAYKIKYPELFFL
LRGSHECASVNRIFGFYDECKRRYNVRLWLTFTDCFSTLPFCALIDDKVLCMHGGLSPDL
KSLDMIREIARPTDIPDAGLVCDLVWADPDKEIRGWGMNNEHSYRFGADVVAEFLQKHDL
DLICRAHQVVEDGYEFFASRGLVTLFSAPKFAGNAGAVMCVDEQLICSFKIFKHGKTRV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcatcaatcgagtttcgtggatgacattatcacccggctgatcgaggttcgc
aatggccgccccgcatgccaggtgcagttagctgagtccgagatccggaagctttgccta
tgtgcgaaggagattttcctgtcgcagccgaacttgctcgagctggaagggccagtcacg
atttgcggtgatattcatgggcagtattgggatttactcacaatctttcaggatggcggg
tttcctccactgacgaattatctcttcctcggtaactatgttgatcttggcaagcagagc
atcgagacgatctgcttactccttgcttacaagatcaagtatccagaactgttcttctta
cttcggggaagccatgaatgcgcatccgtgaacagaatctttggcttctacgacgagtgt
aagaggagatacaacgttcgattgtggttgacgtttacagactgtttcagcaccttacca
ttctgcgccctgatcgacgataaagtcctctgcatgcacgggggactgtcgccggacctg
aaatctctggatatgatcagggaaatcgctcgaccgactgatattccggatgctggacta
gtttgtgatcttgtctgggctgatcctgataaggaaatcagaggatggggtatgaacaat
gagcatagttacagatttggagctgatgtagttgcggagtttttacaaaagcacgacttg
gatctcatctgccgagctcatcaggttgtggaggatggatatgagttttttgcaagtcgg
gggcttgtgacattgttctcggccccaaagtttgccggcaatgctggggccgtgatgtgt
gtggatgagcaactcatatgcagctttaagatttttaagcacggaaaaacacgggtatga
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integrated database retrieval system
