KEGG   Selaginella moellendorffii: SELMODRAFT_235429
Entry
SELMODRAFT_235429 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_235429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_235429
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_235429
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SELMODRAFT_235429
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    SELMODRAFT_235429
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF12 NBCH_WD40 Beta-prop_Nup120_160 Nucleoporin_N CNH Beta-prop_Vps41
Other DBs
NCBI-GeneID: 9657484
NCBI-ProteinID: XP_002988094
JGI: 235429
UniProt: D8SXH1
LinkDB
Position
Unknown
AA seq 346 aa
MATFGVTQNAPSHNPNKSFEIAERPTDGISSLSFSPKANHLIATSWDNQVRCWEIQPNGT
SVAKAATQHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLSSGNQSVTVGMHDAPVKEISW
IPEMNFLVTGSWDKTLKYWDLRSQSPAHTQQLPEKCHSMSVRYPLMVVATADRNISIFNL
TNPRQEFKRIQSPLKFMTRCVSTFPDKQGFLVGSIEGRVAIQHIDDAQQSKNFTFKCHRE
ANDVFSVNAINFHPVFGTFATSGSDGAFNFWDKDSKQRLKAFQRCSLPIPCSTFNYDGTI
FAYAVSYDWSRGAENHVPGSNNYILLHPILEAEIKSKPRAPNSTRK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggcgactttcggcgtcacacagaacgctccgtctcacaatccgaacaaatctttcgag
atcgcagagcggccgacagacggcatctccagcctctcgtttagccccaaagcgaaccat
ctcatcgccacatcctgggacaatcaggtgcgatgctgggaaatccagccgaatggaacc
agtgttgcaaaggcagccacgcagcatgatcaaccagtattgtgctcggcttggaaggat
gatggcacgactgtcttctcaggaggatgcgataaacaggtcaagatgtggcctctttca
tccggaaaccagtcagtaacggtgggaatgcatgatgcgcctgtgaaagagatatcgtgg
attccagagatgaacttccttgttacagggagctgggataaaactctcaagtattgggat
ttacgatctcagtctcctgctcacacccagcaacttcccgagaaatgtcactcgatgagc
gtccgctatcccctgatggttgtcgcaacagcggacagaaatattagcatcttcaatctc
accaatcctcgacaagaattcaagagaattcaatcgcctttaaagttcatgacgcgctgt
gtctcaacctttcctgacaaacaaggttttctggtgggctctatcgaaggcagagtagcc
atccagcacattgacgacgcgcagcaatcgaagaacttcacattcaagtgccacagggaa
gcgaacgacgtgttttcagtgaatgcgatcaattttcatcccgtgtttggaacattcgct
acatcaggctctgatggtgcttttaacttctgggacaaggacagcaagcagaggctcaag
gcgtttcagaggtgcagcctaccaattccttgtagcactttcaactacgatggcactatc
tttgcgtatgccgtgagctatgactggagcaggggtgctgagaatcacgtcccgggatca
aacaattatatcctactgcatccaatactggaggccgaaatcaaatccaagccacgcgct
cccaacagcactagaaagtaa

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