Selaginella moellendorffii: SELMODRAFT_235486
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Entry
SELMODRAFT_235486 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
smo
Selaginella moellendorffii
Pathway
smo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SELMODRAFT_235486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_235486
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SELMODRAFT_235486
Hops complex
SELMODRAFT_235486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf-RING_6
zf-RING_5
zf-RING_2
TPR_16
TPR_11
zf_RING_Vps8_fungal
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
9662708
NCBI-ProteinID:
XP_002988314
JGI:
235486
UniProt:
D8SY54
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MYQWRKFPFFEEKALGSGAAAELGENIVCSSSGRGQIVLGGDDAMVHVLDRGFKLSYSFQ
AHSTSVLHQRNMLVTVGEDEAASAQVSSMSLKLWDLSKHQSEGPSSSRIDPVCDRALRIF
SNKFPEAKITCFLVYEEAPPILLLCFGLESGIVYCIRGDIARERISRLKLLVDPATATSS
ASPITGLGLRLDGQALQLFVVTAATVNLYNMLQHPPQKQVLDGHGCDGLCVAMSDRQELV
IGRQEAIYFYEVDGRGPCWAFEGEKKYVGWFRGYLLAVIADARKSVFNIYDLKSKLIAYS
SEVEDVAQVFCEWGIIAIITKDHKVTCLTEKDMNSKLELLYRKNLYPVAISLVQRQQADA
AATAQVMRKYGDHLYSKQDYDEAMAQYIKTIGQLEPSYVIQKFLDAQLIQNLTLYLERLH
EKALASADHTTLLLNCYTKLKDATKLDKFIRGDEQTGGQLRFDVETAVRVCRAAGYYEQA
LYVAKTAGLHESYLKILLGDLGNYVEALEYISGLSPSEAEVTLKQYGKILVEHKPDETTA
TLLTLCSSDGNATHTSSSSAPPPSPMEFVHIYVDQPRWLIVLLEQYLVKVSSSPIVKDIH
NTLLELYLSDSLASTSPEEESSSSSRKAQVKKTRSFKDAVSNTRETAEERSLRLQKSLDL
LKKGWGAHEEEPQYDAALAVMLCERHKFRDGLLFLYEKKRLFKEVMSCYMKDSDYRGLIS
CCERLADTSRGGDPSLWADVLAYFGERGEDCSKEVKEVLGYIEQYSLLPPLVVLQTLSKN
PTLTLSVVKNYIATQLKQESRQIEDDRKTIQKYDEDNRLMRAEIEELRTKPRVFQLSKCT
ACTSILDLPAVHFFCMHSFHQRCLGDNEKECPVCAPSNHTLLEMKRNLAQNATDHDRFFQ
LVRNSDDGFSVIADYFGRGMLSTHRP
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaatggaggaaattccccttcttcgaggagaaggcgctcggatctggcgccgcg
gcggagctgggggagaacatcgtgtgcagcagcagcggcaggggccagatcgtgctcggt
ggcgacgatgccatggtccacgtcctggatcgaggtttcaagctcagctacagcttccag
gcgcattccacgtctgtgctccaccaaagaaacatgttggtgactgtgggagaggatgag
gctgcttcagcacaggtatcttccatgtccctcaagctctgggatttgagtaaacatcaa
agcgagggcccgagttctagcagaatagatccagtctgtgaccgagctttgagaatcttc
tcaaataaatttcccgaggcaaaaatcacttgttttctggtctacgaggaagcacctccc
atcttgctcttatgttttggcttggaatcgggcatcgtgtattgcatccgtggtgatatt
gctcgagagcgaatctcacgactcaagcttttagttgatccagcaacggccacgagtagt
gcttcgccgattaccggtttgggacttcgactagatggtcaagcactacagcttttcgta
gtaacggcggcgactgtgaatctttacaacatgcttcaacaccctcctcaaaagcaagtc
ttggacgggcatggttgcgatggtctctgcgtggctatgagtgatcgacaggagcttgtt
attggaaggcaggaagctatttatttttatgaggtggacggtagaggtccctgttgggct
tttgaaggcgaaaagaagtacgttggctggttccgcggatatttacttgctgttattgca
gacgcccgtaagagcgtgttcaacatctacgaccttaagagcaagttgatcgcttatagc
tcagaagtggaggatgttgcgcaagtattttgcgaatggggcatcatcgcaattatcaca
aaggaccacaaggttacgtgcttaacagaaaaagacatgaacagcaagctggagcttctc
taccgaaagaatctctacccggttgctataagccttgtccagagacagcaagcagacgct
gcagccactgctcaagttatgcgaaagtatggggatcatctgtacagcaagcaggattac
gacgaagctatggcgcagtatatcaaaactattggacaactcgagccttcttacgtcatt
cagaagtttttggacgctcagctcattcagaacttgacgctctatttggaaagacttcac
gagaaggcactggcatcggcagaccacacaaccttgctactcaactgttacacgaagctc
aaggacgcaactaagttggacaagttcatcaggggggacgagcagacgggaggacagctt
cggtttgatgttgaaacggcggtgagagtatgcagagctgctggctactacgagcaagca
ctgtacgttgcaaaaaccgcggggttgcacgaatcgtatctcaaaattcttcttggagac
ctgggaaattatgttgaagcactggagtatatatcaggactttcaccatccgaggccgag
gttacgctaaaacagtatgggaaaatactggtcgagcacaagcctgacgaaaccacggct
actctcttgacactatgcagtagtgatggcaatgctactcacacaagcagcagcagtgct
ccgccaccgtcaccgatggagttcgtgcacatttatgttgaccaaccgaggtggctgata
gttctcctggagcaataccttgtgaaggtaagcagctccccgatagtgaaagacattcac
aacacgctcctggaactctacctgtccgatagtttggcttctacttctcccgaggaagag
agctctagttcgtcgcgaaaagctcaggttaagaagacgagatctttcaaagacgcggtg
tctaacacccgggagactgccgaagagagatccttgcgcttgcagaagtcactggatcta
ctaaagaaaggatggggtgctcacgaagaggagccgcaatacgatgcagcactggcggtg
atgctgtgtgagaggcataagtttcgtgacgggcttctcttcctttacgagaaaaagaga
ctcttcaaggaggtgatgtcgtgctacatgaaagacagtgactaccgcggcctcatctcc
tgctgtgagcggcttgcggacacgagcagaggtggcgatccttcgctctgggccgatgtc
cttgcgtacttcggggagagaggggaagattgctccaaggaagtcaaggaggtgctggga
tacatcgaacaatactcgctcctgcccccactggtggtgctccagactttatccaagaac
ccgacactcactctctcggtggtgaagaactacatcgctacacaactcaagcaagagtcg
aggcagatcgaggacgatcggaaaacaatccagaaatacgacgaggataataggctgatg
agggccgagatcgaggagctgagaacaaagccccgagtgttccagctgagcaaatgcacg
gcctgcacctcgatcctcgacttgccggccgtccacttcttttgcatgcactccttccac
caaaggtgcctgggtgacaacgaaaaggagtgcccggtctgcgctccttcgaaccacacg
ctgctagagatgaagcggaatctggcacagaacgccacggaccacgacaggttcttccag
ctcgtccggaactcggacgatggattctccgtcattgccgactactttggtcgtggcatg
ctcagcactcatcgtccttag
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integrated database retrieval system
