Selaginella moellendorffii: SELMODRAFT_235886
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Entry
SELMODRAFT_235886 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_235886
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SELMODRAFT_235886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
TPR_ELP1
Beta-prop_ELP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_EML_2
ANAPC4_WD40
HB_ELP1
Beta-prop_IFT140_1st
TPR_GEMI5
Beta-prop_HPS5
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-GeneID:
9629340
NCBI-ProteinID:
XP_002989877
JGI:
235886
UniProt:
D8T2Q0
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MKNLEVLRERHSRLELGDERIVAAAIDSGHDRAFFLSNGGNLHWEEELSRHSLSLGSAIE
FDAGVVGMEFLLELEALVIGMESGDLVLVEPRSSSAIEVIGSLQGGILSLAASPDGELLA
IVSGLGQILLMTPANWDTVHEFSIKNNDRQEFSSSAVELSWRADGKYFATSEYNAQESSS
VVKIWERETGKLHSSCEALPSTHRSSICWSPGGARIAASTSKADQAPSVTIFERNGLKKD
YFQATAPAGARVESLQWDSSGEVMKMVVRCDGWDTIQFWYCSNYHWYLKQEWRYTSKETV
STVWHPEKPLSAMVWTALGNVKATTLGWKSAVLESSVALVIDGPSVLVTPLAVCITPPPL
CFSKVRFPAPVNTVALTSGSSGFTTVAASLSDQTFGLAVLATSDGWNDLEDVEVVGSILQ
NFDGGATDSGEGWTSRSLSLVYLDKPLIAAARSPLTESSQAFLQLNDGSILNHCAGELTP
VGKFPVACPWMQAFEDKGQVQFVGLDERGQLHFRNSIISSDCTGFALHITSTKARPSVVH
LVYKTRQDLLHIIPLGSSNFTSSPPEVLDVGSGKRQPAPKDFNIQRVWERGARIVATLGG
SDVAVIMQPSRGNLETIYPRGLILHAVEAALAEKDFAEAITCARRHRIDLNVIVDFLGEK
EFSCLAPDFVKQVGKLSLVTELVSCLRNENVLETTYKKTLSTLNPENRMVPAVSSNKMQV
VLEALRSAVENHVTDSPSREMCLLAILARNDPPLLEEALKRIKLLREGELGLGTSDDEEA
LEAIESQGKLVAESALKHLIWLADADAVFDAALGLYDLHLAAMVASHSQRDPKEFLPFLQ
ELEDMPPSIMCYKIDCKLKRYASALRHLSSAGETYFNEALDHVQSHPELFSLALSIFTGE
SQRSSIMEAWGGYFLSQERFEDAAITFRSCSQLHKALAAYRAGGHWQGVLMVAGQLSMTP
DEITNLALELREELQAMGRPKEAARVALDYCKDVKDAVGLLIEARDWMEVLRLCYLHAQP
DIVDTIVQPAAVECANGLVGQFQEGVEKVGKYCARFVAVHQRRVLLEAKIKSDQGEDRFD
DETTSEASSNLSGMSVYTRGYVVSGLQEQQRQEEPEPDAKAKFEQGEELALVEHLKNMAI
SPPLADELRPLLQILVFVKRENLSCKLQQAASKFQATQAEAMRAVEENGITVDKTAANRV
VNWSYQALERVL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttggaggttttgcgagagaggcattcgcggctggagctcggggatgagagg
atcgtcgcggcggcaatcgacagcgggcacgatcgcgccttctttctctcgaatggcggc
aatctccactgggaagaggagctctcgcggcattcgctgtccctggggagtgccatcgag
ttcgacgctggcgtggtcgggatggaattcctgctggagctggaagcgctggtcattggc
atggagagcggtgatctggtactggttgagccacggtctagcagcgccatagaagttatt
ggctcgctccagggagggattcttagtctcgctgctagtccagatggggaactgttagct
atagtatcaggactcgggcagatcttactcatgactccagcaaactgggacactgtccac
gagttttcgatcaaaaacaacgatcgccaggaattttccagtagcgctgtggaactctcg
tggcgggctgacgggaagtactttgctacaagcgaatacaatgctcaagaaagcagcagt
gtcgtgaagatctgggaaagagaaacgggcaaactccattcgagctgtgaagcattgcca
tcgacgcatcgctcgagcatctgctggagtccgggtggtgctcgaattgctgccagcact
tccaaggcagaccaggctcccagtgtgacgatcttcgagcggaatggtctgaaaaaagat
tatttccaggctactgctcctgccggtgctcgtgtagaaagtctgcagtgggattccagc
ggagaagtcatgaagatggttgtcaggtgtgatggctgggacacgatccagttctggtac
tgcagcaactatcactggtacttgaaacaggaatggcgctacacgtccaaagagaccgtg
agcacagtttggcacccagagaagcctctcagtgccatggtttggactgccttgggcaac
gtcaaagctaccactttgggttggaagtcagctgtgctggagtcttcggtggcgctggtt
attgatggcccgagtgttttggtcacaccactggctgtctgtataactccgccacctttg
tgcttctccaaggtacgatttcctgcacctgtgaatactgtggcacttacgagcgggtct
tctggttttaccaccgttgcagccagtttatcagaccagacttttggccttgctgttctt
gcaactagtgacggctggaacgacctggaagacgttgaagttgtgggatccatattgcag
aacttcgatggtggtgctacagattctggagaaggatggacttcgcgttctctttctcta
gtctatttggacaagccgctcatagcagcggcgagaagtccccttacagagagctcgcag
gcttttctacagctaaatgacggatcgatcctgaaccattgcgctggagagcttactccg
gttggaaagtttccagttgcatgtccgtggatgcaagcttttgaagataagggacaggtg
cagtttgtcggccttgacgaacgcggccagctccattttcgtaattccatcatcagcagc
gactgcaccgggtttgcactccacatcacatccacaaaagcgaggccaagcgtcgttcac
ttggtttataaaacaaggcaagacttgctccacattatccctctcggtagcagcaacttc
acgtcttctcctccggaagtactagacgttggtagcggtaaacggcaaccagcgccaaag
gatttcaacattcagcgtgtttgggagaggggagccaggatagttgctactctaggtggc
agcgacgttgcggtcatcatgcaacccagccgtgggaatctcgagaccatttatccacgg
ggattgatacttcacgctgtcgaagcggcactagctgagaaagactttgcagaagctatc
acctgcgcacggcggcacaggattgatctaaacgtcatcgtggacttccttggtgagaag
gagttttcctgtttggccccggactttgtcaagcaagtcggcaaacttagccttgtcacg
gagctggttagctgcctgagaaacgagaacgttttggaaacgacgtacaagaagacattg
tctacgctgaatccggagaacaggatggtcccggcggtttcatccaacaagatgcaagtg
gtattagaagcgctgagaagtgctgtcgaaaatcacgtaacagatagtccatctcgagag
atgtgcctgctggctattcttgctcgaaacgatccgcctttgctcgaagaggcgttgaaa
cgcatcaagctactacgtgaaggagagcttggtctcggaacttcagatgatgaggaggct
ctggaagcaattgagtcacagggaaaacttgtggcggagagcgctctaaagcacctgata
tggctcgcagacgccgacgcggtgtttgatgcggcgctgggactttacgacttgcatcta
gctgcaatggtggcgtctcactcccagcgagatcctaaagagttccttcctttccttcag
gagctagaagacatgccaccctccataatgtgctacaagatcgactgcaagctaaaacga
tatgcaagtgcactgcgacatctttcgagcgccggggagacgtatttcaacgaggcactc
gatcacgtccaaagtcatccggagctcttctcgctcgcactctccatctttacaggcgag
agccaaaggtcgtctattatggaggcttggggaggatacttcctttctcaggaaaggttt
gaggatgcagctatcactttcaggtcctgctcgcagctccacaaggctttagctgcgtac
cgtgctggcggtcactggcagggtgtgctcatggttgctggccagttgagcatgacaccc
gacgagatcaccaaccttgcactggagctccgagaagaactccaagcaatgggacggcca
aaagaagctgcgagagtagctctggattactgtaaggacgtcaaggatgctgtcggcctt
ttgatcgaggcaagagactggatggaagtccttcggctgtgctaccttcatgctcagccc
gatatcgtagatactatagtacagccagctgctgtggagtgcgcaaatggattggttggt
cagttccaggagggcgtcgagaaagtcgggaagtattgtgctcgctttgttgcggtacat
cagcgcagggtactgctggaagcgaagataaaatcggatcaaggagaagaccgtttcgac
gacgagaccacatcagaggctagtagcaacttgagtgggatgagtgtttatacacgcggg
tacgttgtgtcaggactgcaagaacagcagcgacaggaagaacccgagccagacgccaag
gcaaagttcgagcagggagaagagcttgctctagtggagcaccttaagaacatggctata
agtccgccgctggcagacgagctcaggcctctgctacaaatccttgtcttcgtaaagcgt
gaaaacttgtcgtgcaaactccagcaagccgcatcaaaattccaagccactcaagcggag
gccatgcgagcagtcgaagaaaatggcattaccgtcgacaagacagcagcaaacagggtg
gtaaactggtcctatcaagccttggaaagggtcttataa
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integrated database retrieval system
