Selaginella moellendorffii: SELMODRAFT_236274
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Entry
SELMODRAFT_236274 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
smo
Selaginella moellendorffii
Pathway
smo03030
DNA replication
smo03410
Base excision repair
smo03420
Nucleotide excision repair
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SELMODRAFT_236274
03410 Base excision repair
SELMODRAFT_236274
03420 Nucleotide excision repair
SELMODRAFT_236274
03430 Mismatch repair
SELMODRAFT_236274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_236274
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_236274
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_236274
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SELMODRAFT_236274
DNA Replication Termination Factors
ELG1-RFC complex
SELMODRAFT_236274
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SELMODRAFT_236274
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SELMODRAFT_236274
Check point factors
HRAD17(Rad24)-RFC complex
SELMODRAFT_236274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_assoc_2
AAA_11
AAA_14
AAA_16
AAA_24
AAA_5
DEAD
ResIII
DUF815
RuvB_N
DNAX_ATPase_lid
AAA_19
AAA_30
AAA_7
bpMoxR
nSTAND3
ATPase_2
Sigma54_activ_2
Mg_chelatase
AAA_3
AAA_28
AAA_18
SLFN-g3_helicase
TIP49
AAA_25
Motif
Other DBs
NCBI-GeneID:
9639485
NCBI-ProteinID:
XP_002991370
JGI:
236274
UniProt:
D8SY80
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MTQELQRSGPWVEKYRPASLADVAAHKDIIDTIDRLTAENKLPHLLLYGPPGTGKTSTIL
AVARKLYGPQFQNMILELNASDDRGIDVVRQQIQDFASTQSISFGEKANVKLIILDEADA
MTKDAQFSLRRIIEKYTKNTRFCLICNYVSKIIPALQSRCTRFRFPPLQAQHVRERLEFV
IDQERLDVTEDGLSAIVRLSNGDMRKALNILQSTQMAEPHVTEAAVYSCTGNPTPKEIEQ
IASWLLNESFQSAYSNIVQLKTSKGLALVDVVRELQPFIFTISMPGNIRVPLINCLADIE
YRLASGPNEKLQLGALVSAFTHTRVALVSAAR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggagctacagcgatccgggccctgggtggagaagtatcgccctgcgtctctc
gcggacgttgcagcgcacaaggatatcatcgatacaattgacaggctcactgcggagaac
aagttgccccatttgcttctctacgggcctcccgggacaggaaaaacatccacgattttg
gctgtggcacgcaagctctatggtccgcagttccagaatatgattttggagctcaatgcc
tcggacgatcgaggtattgatgttgtgagacagcagatacaagactttgctagcacgcag
agtatctcctttggagagaaagcgaatgttaaacttataatcctggatgaagcagatgcc
atgaccaaggatgcgcagttttctctgcggagaatcattgagaaatacacgaagaacaca
aggttttgtttgatttgcaactacgtcagcaagattatcccagcgctgcagtctcgatgc
acacgttttcgttttcctcctcttcaagcacagcatgtcagggagcgccttgagttcgta
attgaccaggaaaggctggatgtcacggaagatggcctgtctgccatcgtgagacttagc
aatggcgacatgcggaaggctttaaatatccttcagtcgacgcaaatggccgagccgcat
gtcacggaagcagcagtttactcatgcacaggaaaccccacgccaaaggaaatcgagcag
attgcgtcctggcttctgaacgagtcattccagtcggcttacagcaatatcgtgcagcta
aagacaagcaaaggactggcgctggtggacgttgttagggagctgcagccgttcatcttt
accatcagcatgcccggcaacatccgcgtgcctctcatcaattgcctcgcggacatcgag
tacaggcttgcgtctggacccaacgagaagctccaactgggagcgctagtgagtgccttc
actcacacacgcgtagccttggtttctgccgcaagataa
DBGET
integrated database retrieval system
