Selaginella moellendorffii: SELMODRAFT_236608
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Entry
SELMODRAFT_236608 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_236608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_236608
04147 Exosome [BR:
smo04147
]
SELMODRAFT_236608
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_236608
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_236608
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_236608
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_236608
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_236608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
DUF87
Zeta_toxin
nSTAND1
RsgA_GTPase
AAA_25
PRK
HUTI_composite_bact
DUF5427
Motif
Other DBs
NCBI-GeneID:
9645430
NCBI-ProteinID:
XP_002992781
JGI:
236608
UniProt:
D8TB22
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MYAFADPLDYLLMAIGTLGAVVHGLAVPVYFYFFGRLVDAFGENYANPSSMASEVSTVSC
WMHSGERQSAKIRIKYLKSILVQDVGFFDTDMCVGEIVNQISSDILIIQDAISEKAGNLI
HFLARFIGGLVAGFVAVWQLALITVAVVPAIALAGGAYAVSLINTAAKSQKANEEAGKIA
EQVIAQVRTVYSFGGEARAAKAYSDALQPTLRLGKRAGLVKGLGIGVTYGLVLCAWALLL
WYAGVLIRHGMSDAGKAFTTILNIVVSGFSLGQAFSNFPALAEGRAAASNIIQMVKRRPA
MLHNQGGRLEEVYGDIELRNICFSYPSRPESLVLKDFSLMVPAGKTIAIIGSSGSGKSTV
VSLIERFYDPLSGDVLLDGTNIKYLELQWLRKQIGLVSQEPILFATTIRENLLYSKEDAT
MEELIEVSKASNAHEFIDLFPEGYETQVGERGVQLSGGEKQRVALARAMLKNPKILLLDE
ATSALDTGSQQLVQDALDRFRVGRTTVVIAHQLSTIRHADSIAVVHHGRIVEMGTHEELL
AKGEKGYWSIPSSNGRKHGYYRYEKVWVRTSVFSFSKRTWFVCRLSDEFSSEESWPRPPR
PSIWRLMQLNKPEWPYALLGTIGAIISGCEFPLFALAITQVLITFYSPDKEFLKKEVSKF
SLILTGSTICVVFSHMLQHYSFGAMGESLTKRVREMMFLGILNNEISWFDEEDNRCGLVA
SRLASDATMVRVVIADRMSTIVQNLALMFVAFFIAYVLEWRVAVVITATFPLLLIALVGE
QMFLKGFSGDLSKAYSRASTVASEAVGNIRTVAAFCSEKKVIDSFVRELQVPKRKVFLRG
HVAGVCYGISQFFLYTSYALGLWYSSVLIKKGVTGFANAIKTFMVIIITAFGVAETLATA
PDLIKGSQALYAVFEIMDRKGQINPNTRAMEISNVKGDVDFRHVEFSYPARKDVVIFRDL
SLRIRAGKSLALVGASGSGKSSVVALIQRFYDPVSGYIMIDGKNIRSLNLQSLRRHIGLV
QQEPALFSCSIYENILYGKEGASEAEIVQAAKTANAHGFISSLPNGYQTQVGERGVQLSG
GQKQRVAIARAVLKCPAILLLDEATSALDAHSEKQVQEALDRVMRGRTTLIVAHRFSAIR
NADIIAVVQDGTVVEQGSPKELLSNRNSAYFQLVKLHARHRTSKLEIL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcttttgctgatcctcttgactatcttctcatggcgattggaacactgggagct
gtggtgcatgggcttgcggtgcccgtgtatttctacttttttgggaggcttgtggacgct
ttcggggagaactacgcgaatccatccagtatggcatccgaggtttcaactgtttcgtgc
tggatgcactctggtgagcggcaatctgccaagatacgcatcaagtacctcaagtcgatc
ctcgttcaagatgtgggattttttgacacggatatgtgtgttggcgagattgtgaaccag
atatcaagtgatatactcatcattcaagatgccatcagtgagaaggctggcaaccttatt
cactttctagcaagatttataggaggtttagttgcaggttttgtggcagtatggcaactt
gcacttattacagttgctgtggttcctgcaattgctcttgctggaggtgcctatgcagtt
tcacttatcaacactgctgcaaagagccagaaagctaatgaagaagctggaaagattgca
gaacaggtcattgctcaagtgaggactgtttattcttttggaggagaagcaagggccgct
aaggcttattcagacgccttgcagccaaccttgaggcttgggaagcgagcaggccttgtt
aagggccttggaattggagtaacttacgggcttgttttatgtgcctgggctctgctgcta
tggtacgccggcgttcttattcggcatggaatgtctgatgctggaaaggcttttacgact
attctcaacatagttgttagtggtttttctctcggacaagcgttctccaactttcctgct
cttgcggaaggtcgggcagcagcttccaacataatacaaatggtgaaaagaaggccggcc
atgcttcataatcaaggcggacgacttgaagaagtttatggggacattgagctgcgaaat
atttgctttagctatccttcccgaccagagtctttggttctgaaagacttttctttgatg
gtgcctgctggaaagacaattgcgattatcggtagcagtggctctggcaaaagtaccgtg
gtttctctcatcgaacgtttctatgacccgctttccggtgacgttcttttggatggaaca
aacataaaatatttggagcttcagtggttgagaaaacagattggtcttgtaagtcaggag
ccgatattgtttgcaaccactattcgagaaaatctgctctacagcaaagaagatgcaacc
atggaggagttaatagaagtctctaaagcttcaaacgcacacgaatttattgatctcttt
cctgaaggctacgaaactcaggttggtgaacgaggtgtgcaactttctggcggagaaaaa
caaagggtggcactggcaagagcgatgctcaagaatccaaagatacttcttctggatgag
gctacaagtgcactggatacaggttcgcagcagctggttcaggatgcacttgatcgattt
agagtcggccgaacaacagtggtgatcgctcaccagctttcaactatcaggcatgcagat
agtattgcggttgttcatcacggaagaatcgttgaaatgggaacgcatgaagagctatta
gctaaaggggagaaaggatactggtctattcctagttcaaatggccgaaaacatggctac
tatcgctacgagaaagtctgggtaaggacgtccgtattcagtttttcaaaaaggacttgg
tttgtatgcagactatcggacgagttttcttccgaagaaagctggccacgtccgcccaga
ccctcgatctggaggctaatgcaactcaacaaaccggaatggccatatgctttactcggt
actattggagcaatcatatccggatgcgagtttcctttgtttgccttggccatcacgcaa
gttttgattacgttctacagtcctgacaaggaattcctcaagaaagaagtcagcaagttc
tcgctcatattaaccggttccaccatctgtgttgttttcagccacatgctccagcactat
tcgtttggagccatgggtgaaagtctgacgaagcgagtgcgagaaatgatgttcctaggt
attctcaacaatgaaatatcctggtttgacgaggaagataacagatgtggactagtagct
tctcgcctggcatctgatgcgacaatggtccgagtcgtcatcgctgaccgcatgtccact
attgttcaaaatctcgccttgatgttcgtggctttcttcattgcatacgttctggaatgg
cgcgtggctgttgtcattacagcgacgttcccactgttgctcatagcgttggttggcgag
caaatgtttctaaaaggcttcagtggagacctctcaaaagcatactcgagagccagtacg
gtggcgagcgaggccgtcggaaacattcgcacagttgctgccttttgctccgaaaagaaa
gtcatcgattcttttgttcgagagctccaggtaccgaagcggaaggtcttcctcagaggt
catgtagcgggtgtttgctacggcatctctcagttcttcctttacacctcgtacgcgctg
ggattgtggtacagctccgtgctgatcaagaaaggcgtgacaggttttgcgaacgctatc
aagacgttcatggtgattataatcactgcattcggggttgctgagactctggccacagct
ccagatttgatcaaaggcagccaggcattatacgcagttttcgagatcatggatcgtaag
ggccagataaatccaaacacgcgagccatggagatcagcaacgtgaaaggcgatgtagac
tttaggcacgtcgagttcagctatccagcccgcaaagacgtggttattttccgggacttg
agcttgaggatcagagccggcaagagtttggccttggttggagctagcggctcaggcaag
agctccgtggtggctctcatccagaggttttacgacccggtatccggctacatcatgata
gacggcaagaacatcaggagcctcaaccttcagtctcttcgcaggcacatcggcttagtc
cagcaggagccggctctcttttcatgcagcatttacgagaacatcctctatggcaaagag
ggagcctccgaggccgagatcgtgcaggcagcaaagacggccaatgctcacggctttatc
agcagcttaccaaacggctaccagacacaagtcggcgagcgaggcgtccagctctcgggt
ggccagaagcagcgagtcgccattgctcgagcggttctcaagtgtcccgcgatcctcctc
ctggacgaggcgacgagtgcgctggatgcacactccgagaagcaggtccaggaggcgctg
gaccgagtgatgcgaggcaggacgacgctcatcgtcgcgcaccgattctcggccatccgg
aacgcggacatcatcgcggtcgtgcaggacggcacggtggtggaacaaggcagccccaag
gagctcctcagcaacaggaacagtgcttacttccagctcgtcaaactccatgcccgccac
cgcacgagcaagctggaaatcttgtaa
DBGET
integrated database retrieval system
