Selaginella moellendorffii: SELMODRAFT_267442
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Entry
SELMODRAFT_267442 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12400
AP-4 complex subunit epsilon-1
Organism
smo
Selaginella moellendorffii
Pathway
smo04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
SELMODRAFT_267442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_267442
Membrane trafficking [BR:
smo04131
]
Endosome - Golgi transport
Others
AP-4 complex
SELMODRAFT_267442
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT
INTS1_R4
HEAT_2
HEAT_GCN1
HEAT_GCN1_C
TOR1L1_N
PDS5
HEAT_EZ
HEAT_EF3_N
PHAT_SMAUG
Motif
Other DBs
NCBI-GeneID:
9633464
NCBI-ProteinID:
XP_002970684
JGI:
267442
UniProt:
D8RI00
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MEQLKTIGRELAMGSQGVWGSSKEFLELVKTIGEAKSKAEEERIVLAEIESLKRRIQEPD
VPRKKMKEYIMRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRSGYLAVTLFLNEDHDLI
ILIINTIQKDLKSDNYLVCCAALTAVCRLINEETIPAVLPQIVELLNHQKELVRKKAVMA
LHRFFQRSPSTVSHLFPAFQERLCDRDPSVMSAVLCALYDMILVNVKPFKHLVASLVSIL
KQAVEHRLPKSYDYHRTPAPFVQIKLLKILALLGTGDKAASENMFNVLGDILKRSDSTSN
IGNAILYECVRTLTSIYTNPRLLQNAAEITAKFLKSDNHNLKYMGIDALGRLIKITPECA
ENHQLAVIDCLEDPDDTLKRKTLDLLYKMTKANNVEVIVERMVEYIRNISDNHYKTEISS
RVIELAERYAPSNQWFIQTMNQVFEIAGDLVPQKVAHDLMRLIAEGAGEEDEDADSHLRS
SAVQAYLQILKEPKLPSILLQVISWVLGEYGIADGSHSAEFIIGKLCDIVATRPGDDKLK
GYVVSAITKICAFEKAAGQTVDLIPECVSFIEELYASHSTDLQQRIYEFHAVLKLDRDTI
ASILPMDASCEDIEVDKDLSFLNSFVESALANGSRPYLSDNERRGMGAMTTLASNNDAGT
SSLLRFQPYEKPSIPEPAAALVTASHYSQDAIDQHDIYSKSSSNDGTRLKLEGVQKKWGR
PTYTPEAQVPKNPINISDSVKVSSSAAGKEASSRNSSAPPYTERKQPSQEISAEKKKLAA
SLFGSKAGETKAKPAAKLQQNGTSKKAPAKPTSPPAPAPAPPPADLLDLSDSLPQIPSVD
PVDQLADLISVDSSAATSTTSLVEQVLDAGKVATKGPSPQASLQKDSVSRQVGVTPSGGT
NPDLFKDLFG
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcaagacgattgggcgggagctggcaatgggctcccagggggtgtgggga
tcgtccaaggaattcctggagctcgtcaagacgattggcgaggcgaaatccaaggccgag
gaggagaggatcgtgctggcggagattgagagcctcaagcgccggatccaggagccggat
gtgccccggaagaagatgaaagagtatatcatgcgcctcgtctatgtggagatgctcggc
cacgacgcttcctttggctacatccatgccgtgaagatgacccacgatgacaatctcttg
ctcaagagatccggctacttggcggtcacgctctttctcaacgaggaccacgatcttatc
atcctcatcatcaataccatccagaaggatctcaagtcggacaactatctcgtgtgctgt
gccgcgctcactgccgtgtgtcggttgatcaacgaggagacaatccccgcggttcttccc
cagatcgtcgagcttctcaaccatcaaaaggagctcgtgaggaagaaggctgtcatggct
ttgcacagatttttccagaggtctccttcgactgtgtcgcacctctttccagctttccaa
gagagactttgtgatagagatcccagcgtgatgagtgctgttttgtgcgcgctctatgac
atgatcctcgtaaacgtgaagcctttcaagcatttagtagcgagtctggtcagcattttg
aagcaagccgtggaacacaggctgccaaagtcgtatgactatcaccggactccagcacct
ttcgtgcagattaagttgctgaaaattctcgctttgctcgggacaggtgacaaggctgcc
agcgaaaacatgtttaatgtgctgggagatattctcaagcgctcggattcgaccagcaac
attggcaacgcgatcttgtacgagtgcgtcaggactctgacatcaatctacaccaatcct
cggctactgcaaaatgcagcggagataaccgcaaagttcttgaagagtgataaccataac
ttgaagtacatgggaattgatgccctgggtcggcttatcaaaattacgccagagtgtgcc
gaaaatcatcaactggctgtcattgactgcttagaggatccagacgatacgttaaaacgg
aaaacgctggatctattatacaagatgacaaaagccaacaatgtcgaagttattgtggaa
cgcatggtggagtacatcagaaacatcagcgataaccactacaaaacggagatttcttca
cgagttatagagctggctgagcgatatgcaccaagtaaccaatggtttatacagacgatg
aaccaggtattcgaaattgcgggagacctcgtgcctcagaaggttgcgcatgacttaatg
cgtctcatagccgaaggagctggggaggaggatgaagatgctgacagtcaccttagatcg
tctgcagttcaagcttatctacaaatactgaaggaaccaaagcttccctcgatacttctt
caggttatcagctgggtgctaggtgaatatggcattgcggacggcagccactcagctgaa
ttcattataggaaaactatgtgatattgtcgctacacgccctggtgatgacaagttaaag
ggttacgttgtttcggcaattacaaaaatctgtgcattcgagaaagcagctgggcagaca
gtagatctcattccagagtgcgtctcgttcatcgaggaactgtacgcttctcattctacc
gatctacagcaacgcatctatgaattccacgccgtgctaaagctagacagagataccatt
gcaagtatcttgcctatggatgccagctgcgaagacattgaggtggacaaggatctctcc
ttcctcaactctttcgtcgaatccgccttagcaaatggctctagaccatatctatccgac
aatgagcgccgtggaatgggtgcaatgacaaccttggcatccaacaatgacgctggtacg
tcgtctttacttcgtttccagccttacgagaagccaagcatcccggagcctgccgcagct
ctcgtcactgcgtctcattatagccaagacgcgatcgaccagcacgacatctattctaaa
tctagcagcaacgacggcacgagactcaaactcgagggagtccagaaaaaatggggtcgt
ccaacgtacactcctgaggcgcaggtgccaaagaatcccatcaacatatccgacagtgtc
aaggtaagcagcagcgcagcagggaaagaagcatcgagtagaaacagcagcgctcctccc
tacacggaaagaaagcagccttcgcaggagatctctgccgagaagaagaagctcgcagca
tcactctttggaagcaaagcaggagagactaaagccaagccggcagcaaagctacaacaa
aatggaacgtcgaaaaaagctccagcaaagccaacttcgccgccagctccagctccagct
ccaccgcctgctgatctactcgacttaagtgacagtctacctcagattccctcggtggat
ccggttgatcagctggcggatctaatctcggttgatagctcggctgctacgtcgaccact
tcgctcgtcgagcaagttttggacgctggaaaagttgcgacgaaggggccatcgccgcaa
gcatcgttgcaaaaggacagtgtttcacgccaagtgggggtgacgccgagcggaggaaca
aacccggaccttttcaaggatttgtttggatga
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