Selaginella moellendorffii: SELMODRAFT_268258
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Entry
SELMODRAFT_268258 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K17890
autophagy-related protein 16-1
Organism
smo
Selaginella moellendorffii
Pathway
smo04136
Autophagy - other
smo04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
SELMODRAFT_268258
04136 Autophagy - other
SELMODRAFT_268258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_268258
03029 Mitochondrial biogenesis [BR:
smo03029
]
SELMODRAFT_268258
Membrane trafficking [BR:
smo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
SELMODRAFT_268258
Others
Specific organelles associated proteins
Auto phagosome
SELMODRAFT_268258
Mitochondrial biogenesis [BR:
smo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
SELMODRAFT_268258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
DSE1_N
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ATG16
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
WDR90_beta-prop_4th
ASA1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_NWD2_C
NBCH_WD40
Ge1_WD40
ODF2_C
Beta-prop_WDR75_2nd
CCDC39
Beta-prop_IFT80_2nd
ATG14
Peptidase_U57
CEP135_N
TP_0179
TSC22
Fib_alpha
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
9634124
NCBI-ProteinID:
XP_002979247
JGI:
268258
UniProt:
D8S7R6
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MPVPEERAAAAIAQACVALRRRKAVEEGAHASLVAALDRALTNQGTEIQEKMESLQQELS
QSYKTQAHVSEQLVVEMQTAQALRAQLAEKDALVLEIQHELSSARARISQLEKDFEAKEN
AVLVLVEELTQLKLRVKELESSLQAIEAENNMLVDRWMTQKMQDADRLNEANAMYADMME
RCKINSLAELAKLQVDGIVRHSEAGAESYMTLGAPSKVRHTLRAHDKGGCAAIIFEHSSD
TLLTAGHDGIVKFWDTQRGGTPTKTLTGALGSVLDLALTPENNMVLGGCSDHKLYLWDSR
SGRVKHVLTGHTEKVTSVDISNVRAASTASDRTIKTWDLQTGYSLHTMIFHSNCNSLCIS
SDGAAICSGHTDGILRFWDTRTGKLAKELTAHEPQAITSVSLSRSGLTVLTSGKDNVLKL
FDVRSLELKATFRGPGYTVATSLSRSCLSRDENYVAAGSGDGSVCIWNRRSWEVESVLKG
GHGSAVVACAWSPASKSLASADRNGVVCVWE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcccgaggagagagctgccgccgccattgctcaagcatgcgttgccctgcgg
cgacgcaaggccgtcgaggaaggagctcatgcatcgctggtcgcggcgcttgatcgggcg
ctcacgaatcagggcacggagatccaggagaagatggaatctcttcagcaggagctgtcc
cagagctacaaaacccaggctcatgtgtcggagcagctcgtcgtagagatgcaaacggcg
caagctctacgagcgcaactggccgagaaggacgcgcttgttttggagatccaacacgag
ctaagctccgcgagggcgcgtataagccaattggagaaggactttgaagcaaaggagaac
gctgttcttgtgctcgtcgaggagctcacacagctaaagctccgagtgaaagagctcgaa
tcgagcctccaagccatagaggctgagaacaatatgcttgttgatcgctggatgacgcag
aaaatgcaagacgctgatcgacttaatgaggctaacgccatgtatgctgacatgatggaa
cgctgcaagatcaacagccttgccgagctagcgaagctccaagtcgacggcattgtaagg
cactcggaagctggcgccgagagctacatgacgctgggcgcgccgagcaaagtccgccac
acacttcgtgctcacgacaagggaggctgcgccgccatcatcttcgagcacagcagcgac
accctcctcaccgccgggcacgacggcatcgtaaagttctgggacactcagcgcggagga
actcccacgaaaactctcaccggcgctctcggctcagtactggacttggcactcaccccg
gagaacaacatggttctcggcggctgcagcgatcacaagctctacctctgggactcccgc
tccggccgagtgaagcacgtcctcacaggccacaccgagaaagtcacctccgtggacatc
agcaacgtgagagccgcgagcacggcctcggacaggaccatcaagacttgggacctccaa
acgggctacagcctccacacgatgatcttccacagcaactgcaactctctctgcatctcc
tccgacggcgcagcgatttgctccggccacacggacgggatcttgcgcttctgggacacc
cgaacagggaagctggccaaggagctcacggctcacgagccacaggccataacttcggtg
tcgctgtcccggagtggcttgacggtgctcaccagcggcaaggacaacgtcctcaagctc
ttcgacgtgaggagcttggagctcaaggcgactttcagggggccgggctacacggtggcg
acgagcttgagccgatcgtgcttgagccgggacgagaactatgtggcggcgggctccggc
gatggaagcgtttgtatctggaatcgccgctcctgggaggtggagagcgtgctcaaaggc
gggcatgggagcgcggtggtggcgtgtgcttggagcccagccagtaagtcactggcctcg
gccgatagaaatggtgtggtgtgtgtgtgggagtga
DBGET
integrated database retrieval system