Selaginella moellendorffii: SELMODRAFT_268576
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Entry
SELMODRAFT_268576 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_268576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_268576
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SELMODRAFT_268576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
DUF6657
WDR55
Acyl-ACP_TE
Motif
Other DBs
NCBI-GeneID:
9660913
NCBI-ProteinID:
XP_002982304
JGI:
268576
UniProt:
D8SGC2
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MEDDPKLPELKLDAKQAQGFIKFFRKLPEDPSVIRFFDRRDYFTAHGDNASLIARLYYRT
TTALRQVGSGSDTLSSVSISKSMFEVITRDVLLEKTEYNVELYEGSGGNWKLAKSATPGK
LGSFEDVLFSSIDMHDTPVVMAVWTVARDQEQLVGIAFTDMTRRTLGTLEFLDDDQYTNL
ESALLALGCRECVLPAENAKSVDGRRLRDVLARCNVRLTEKKKAEFKSRDIEQDLSRLIK
STSVEELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQYSLDRYMRLDAAALRA
LHVLESKNDPNKNSTLFGLMNRTSTAGMGKRLLNRWLKQPLLDVDEIKHRHDVVQMFVED
AELRESLKNCLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRLSVVKDALERYEGEFAS
AIEERYVVPLREWTLAEHLGRYDALIESAIDLDQIKNGEYIISASYDSSLKTIKADRDAV
EEEIREAHEQAANDLDLPADKSLKLDKTTQWGHVFRITKKEEPKVRKKLAVQYITLETRK
DGIKFTTSKLRRLSERYGNLTENYTNTQRDLVKRLVQVSQSYVEIFNGAANLLAELDVLL
SFADLAVSSPTPYVRPIITGQNEGDIILEGSRHPCVEAQDDVNFIPNDCRLIRGKSWFQI
ITGPNMGGKSTYIRQIGVNILMAQVGCFVPCYRAEISIRSCIFARVGAGDCQLRGVSTFM
AEMLETSAILKSATETSLIIVDELGRGTSTYDGFGLAWAICEYIVDVTRAPTLFATHFHE
LTSISHRQGPSAHGPSKGPPVGISNFHVSAHIDPSSRKLTMLYKVEDGPCDQSFGIHVAE
FARFPECVVALAKQKAAELEDFSPQAILEDEGDAGSKRKRSSSSSSSSGDKGWKFLKGFA
AMPLDQMSHEHALKKVQELKAEFLDDLPVNTLEAVA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatcccaagctgccggagctcaagctagatgcgaagcaagctcagggtttc
atcaagttctttcgcaagctgccagaggatccatcagtgattcggttcttcgatcgacgg
gactatttcactgcccacggggacaatgctagtcttatcgccaggctctactatcgaacc
acgaccgctcttcgtcaggttggatctgggtctgatactctctccagcgtaagcatcagc
aagagcatgtttgaggtgatcactcgggacgtcctgctggagaagaccgagtacaacgtg
gagctctacgaaggcagtggaggaaactggaagctcgcaaagtccgcaactccgggaaag
cttgggagcttcgaagacgtcttgttctcgagcatcgacatgcacgacacgccggtggtg
atggcagtctggacagtcgcccgtgatcaagagcagctcgtcggcatagccttcacggat
atgacgagaaggacgctgggcacactagagtttctagacgacgatcaatacacaaacttg
gagtcggctctgctcgctctgggatgccgggagtgcgttcttcctgcggaaaatgccaag
agcgtcgacggtcggagactccgagacgtgctggctcgatgcaacgtgcgactgactgag
aagaagaaggcggagtttaagtcccgagacatcgagcaagatctaagccggcttatcaag
agtacatcggttgaggagctccgagaactcgttgtcaagtatgaagttgcgtcagcggca
ttagcagctctacttgcgtacaccgatatcttcgcagacgacagtaatcacgggaagtat
aggcttcagcagtacagcctcgacagatacatgcggctggacgcggccgcattgcgagcg
ctgcacgtactcgagtccaagaatgatccgaacaagaactcgaccctctttggactgatg
aatcgcacgtccactgctgggatgggcaagaggctactgaacaggtggctgaagcagcct
ctacttgacgtcgatgagatcaaacacaggcatgacgtcgtccagatgtttgtagaagac
gccgagctgcgggaaagtttaaagaactgcctcaaacgtgtgccggatgttgagcgcctg
acacggaagctcgagaggtcgagagctacgttgcaagacctcgtgaagctttatcaggta
agtgttcgtctctccgtcgtcaaagatgctcttgaacgttatgaaggcgagtttgcgtcc
gccatcgaggaacggtacgtcgttccgttgagagagtggacgcttgctgaacatctcgga
agatacgacgcactgatcgaaagcgccatcgacctggatcaaatcaagaatggcgagtac
atcatttcggcatcatatgacagcagcttaaaaaccatcaaagctgaccgtgatgctgtg
gaggaagagatccgtgaagctcatgaacaagccgcgaacgatttggatcttcctgctgat
aagtcgctgaagctggacaaaacgacgcagtgggggcacgtattcaggatcacgaagaag
gaggagcctaaagttcgcaagaaacttgcggtgcaatacatcaccttggaaactcgaaag
gatgggataaagttcacgacttccaagcttcgaaggcttagcgaaagatatgggaacctg
acagaaaattacaccaacactcaaagggatcttgttaagaggctggttcaggtttcacag
agctacgttgagatttttaatggtgcggcaaacctgctggcggaactggatgtcttgtta
agctttgcggatctggctgtaagcagtcccacgccttacgtaaggcctattatcactgga
cagaatgagggcgatattatcttggagggaagcaggcatccttgcgtagaagctcaagat
gacgtgaacttcatcccaaatgattgtcgcctgattcgaggcaagagctggtttcaaatc
atcactgggccaaatatgggaggcaaatcaacgtatatccgtcagattggtgtgaatatc
ttgatggctcaagtcggctgctttgtgccctgctatcgtgctgaaatcagcatacgaagt
tgtatcttcgcccgggttggagcaggagactgccagttgcgtggtgtttcaacgtttatg
gcagagatgctcgaaacctcagcgatattaaaatctgcaactgagacttctctaataatt
gttgacgaactcggccggggtacctcgacttacgatggatttggtctggcttgggcaatc
tgtgagtacatagtggatgtgactagagcgccaactctatttgcaactcacttccacgag
ctcacgtccatttctcatcgtcaaggtccatcagctcacggtcccagcaaaggtcctcct
gtaggaatctccaactttcacgtgagcgcgcacatagatcccagttcccgaaagctcaca
atgctttacaaggttgaagatggcccttgcgaccagagcttcggcatacacgtcgcggaa
ttcgctcgatttccagaatgtgtcgtcgcgctcgccaagcaaaaggctgccgagctcgaa
gacttctcgccacaggcgattctggaggacgaaggcgacgctggaagcaagcgaaagaga
agcagcagtagcagcagcagcagcggggacaaaggctggaaattcctcaagggctttgct
gcgatgccgctggatcagatgagccacgaacacgccttgaagaaggtccaggagctcaaa
gccgagttcctggacgaccttcccgtcaacactctagaagcagtagcgtaa
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