Selaginella moellendorffii: SELMODRAFT_268770
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Entry
SELMODRAFT_268770 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_268770
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_268770
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Helicases
SELMODRAFT_268770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
B277
Motif
Other DBs
NCBI-GeneID:
9643824
NCBI-ProteinID:
XP_002983763
JGI:
268770
UniProt:
D8SK25
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MEEIKELGVAEWLVGACKELGMRHPTPVQRACVPQILKGKDVLGMAQTGSGKTAAFALPI
LQRLGENPYGIFALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQILTER
PHVVIATPGRIKAHLGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTIFDGISKQRQ
TLLFSATMTGDLQALRDLFGHRAFFYQAYEGLKTVESLDQRYIFMPGKVKNVYLTYLLEN
LELGDIRSVIIFVSRCRTCHLLSLILDELGISAVALHSVKTQPQRLAALNQFKSGQATIL
IATDVASRGLDIPTVDLVVNYDIPRFTKDYVHRVGRTARAGRGGRAISLVTELDVELVHE
VESFLGKKLEEYEVSESDVLKNITKVYKAKRVAIMKMEDSGIQEKMDARKKMKVKSRA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatcaaagagctgggagtggcggaatggctcgtcggcgcctgcaaggagcta
ggtatgcgccatcccacgccggtccagagggcttgtgtgccgcagattctcaagggaaag
gatgttttgggcatggcgcagactggaagtggcaagacggccgcatttgcgctgccgatt
ctccagcggctgggagagaacccatacgggatctttgcgctcgtcatgacccccactcgc
gagctcgccttccaaatctccgatcagttcaaggcgctgggcgctggagtccatttgcgc
tgtgctgtggttgtgggtggcatggacatgacgacgcaagcacagattttgacggaaagg
cctcacgttgtgattgcgacgccgggaaggatcaaagctcatcttggcagtgatccagac
atcgctgccgccttctccaaaacgaagtttttggtgcttgatgaggcagacttgctgctt
gatcgcgggttccaagacgagctgcaaaccattttcgatggcatctccaagcagcggcaa
acactgctcttctccgccactatgactggggatcttcaggcgctgcgagacctgtttggc
cacagggccttcttctaccaggcatacgaggggctcaagactgtggagtctctcgaccaa
aggtatattttcatgccggggaaggtaaagaacgtctatctcacgtatcttctggagaac
ctcgaactgggagacatacgctcggttatcatctttgtgtcccgctgcaggacgtgccat
ttactaagcttgatactggacgagcttggcatctctgctgtggctctacattcagtgaag
acgcagccccagcgattggcggctctgaatcagttcaaatctgggcaggcaacaatcctg
attgcaaccgatgttgccagtcggggcctggacattccaaccgtggatctagtcgtgaat
tacgatattccgaggtttactaaggattacgtccatagagtcggacgaactgcgcgtgct
gggcgtggtggacgtgcgatctctcttgtaaccgagcttgacgttgagctggtacacgaa
gtggagtcctttctcgggaagaagctggaggaatacgaagtcagtgaatcggacgtgctg
aaaaacattaccaaggtctacaaagcaaaacgagttgcaatcatgaaaatggaagatagc
ggcatccaagagaaaatggatgcccgtaagaagatgaaagttaagtctcgagcatga
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