Selaginella moellendorffii: SELMODRAFT_269202
Help
Entry
SELMODRAFT_269202 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00052
Galactose metabolism
smo00511
Other glycan degradation
smo00600
Sphingolipid metabolism
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SELMODRAFT_269202
09103 Lipid metabolism
00600 Sphingolipid metabolism
SELMODRAFT_269202
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SELMODRAFT_269202
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SELMODRAFT_269202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-GeneID:
9662790
NCBI-ProteinID:
XP_002987061
JGI:
269202
UniProt:
D8SUJ8
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MDAAGASHRDWEDPAVFGKNKRNPHVPLYSHSSVQEAVDFWIARSQADRELANSAVWDDD
AVPAALDSARFWCEGASSLISLSGYWKFFLASKPESVPHWFYKNQFNDSSWKTLPVPSNW
QMHGYDTPIYTNVTYPFPFDPPLVPRENPTGCYRRSFVVPPEWAGRRVFLRFEAVDSAFY
AWVNGALIGYSQDSRLPSEFEITSLCTEKENILAVQVMRWSDGSYLEDQDHWWLSGIHRD
VILFSKPQVMISDYFVKTHLTRDMRQATVEMDVSIEGATKLTKEMALRVRGFLFDPVESE
QQEPETIPTKVVDIISAHHGRTVLTISVDNPKLWSAEKPSLYTLVVVLEDNNGGTADCES
CRVGIRQVSAQPKGLLVNGQLVTICGFNRHEHHPRLGKTNVEACMARDIVLMKQHNVNAV
RNSHYPQHPRWYELCDLFGLYVVDEANIETHGYELIESTLRKHPAGEAMWTHALLDRFVN
MVERDKNHSCIIIWSLGNESGYGPAHDAMAGWAHCRDPTRLVQYEGGGSRTSATDIICPM
YMRVWDTVKIANDTSELRPVILCEYSHAMGNSNGNIYKYWQAIDTTYGLQGGFIWDWVDQ
GLIQTEGGSRRWAYGGDFGDTPNDLNFCVNGLVWPDRSPHPALEEVKYCYQPLGIHIDGD
EIEIWNKRSFTTSEDLAFEWSLSTDGSLLKSGSWNVPPIEPREKYRMPLNAGPWSSLCDD
ILGSDVALTITATLATSTRWACAGQVVASQQCFLPSKQPYSLQTVKFSDPLSTDISTSTV
VVAMPQHSWELKFDRSTGRSSWRLGDMLLMSKGPLPCFWRAPTDNDKGGDKISYAYRWKA
FGLDRLAITGTTGFQAKQLSSHLVLLEGVLFIEPESGSGDEKREISIRSKEDGTDWFKVS
VSYMIYSSGDFVAQYKVEANPRLPPLPRVGIVFSISNECNAAEWYGRGPFECYPDRKAAA
QLGIYKQKVSDLHAPYIVPGECGGRADVRWVAFKNVEGDAGLFAMPFQGSPPMQMSASNY
STEELDRATHEEELHAGQDIEVHLDHKHMGLGGDDSWSPCVHDEYLVLPRNYEFAVRFSP
LSLAASSQELYRQRLLPE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgctggagcttcgcatcgcgactgggaggatcccgcggtgttcggcaagaac
aagcgcaatcctcacgtcccgctctactcgcattccagcgtccaagaggctgtggatttc
tggattgcgcgcagccaggccgatcgggagctcgccaattcagctgtgtgggacgacgat
gccgtcccagctgcgctcgatagcgccaggttttggtgtgagggagcctcgtctttgatc
tcactcagtggctattggaagtttttccttgcttccaagcccgagagtgtaccgcattgg
ttctacaagaatcaattcaatgacagcagctggaagacactgcccgttccatcgaattgg
cagatgcatggatacgacacgccaatctacaccaatgttacgtatccttttccttttgat
ccaccgctggtacctcgagaaaatccaactggatgctatcggagatcattcgttgtcccc
cccgagtgggctggacgaagggtgtttttaagatttgaggccgtggattctgcgttttat
gcctgggtgaatggtgcgcttattggctacagtcaggacagccgtcttccatccgaattt
gagataacaagcctctgcacagaaaaggaaaatattctagctgttcaagtgatgcggtgg
agtgatggatcgtatcttgaagaccaagaccactggtggctatctgggattcaccgagat
gtgatactgttttcaaagccgcaagttatgatcagcgattattttgtgaaaactcatctt
accagagacatgaggcaggcaactgtagagatggacgtgtcgattgaaggagcaactaaa
ctaacaaaagagatggctttacgcgtgagaggatttctttttgacccagtcgagagtgaa
cagcaggagcctgaaaccattcccactaaagtcgtggatattatctctgctcatcacgga
cgaacagtgctgacaatttctgtcgacaatccaaagctgtggtctgcagaaaagccaagc
ctgtacacactggtagtggtcttggaggataacaatggaggtactgctgattgcgaatcc
tgccgagttggaatccggcaggtttcagctcaaccaaaaggactgttggtgaatggtcaa
ctcgtgaccatatgcggtttcaacaggcatgaacatcacccacgcctgggaaagacaaac
gtggaagcgtgtatggcgagggatatcgttctcatgaagcagcataatgtgaatgccgtc
agaaatagtcattatccgcagcatcctcgctggtatgagctgtgtgacctctttggactg
tacgtggtggacgaggcaaacattgaaactcatgggtatgagctcattgaatcaaccctt
cggaaacacccggctggcgaagcaatgtggacacacgcactacttgaccgctttgtcaac
atggttgaaagggataaaaaccattcgtgcatcatcatatggtctcttggtaatgaatcg
ggatacggaccagcgcatgatgccatggctggttgggctcattgtcgagatcccacgaga
ttagtgcagtatgaagggggtggctcaaggacgtctgcaacggatataatatgccccatg
tatatgcgcgtctgggacacagtgaagattgcgaacgacacttctgaacttcggcctgtt
attctatgcgagtattcgcatgccatgggaaatagcaacgggaacatttataagtactgg
caagctattgacaccacctatgggttgcagggtggctttatatgggattgggttgatcag
ggcctcatacaaacggaaggtggctcaagacgttgggcatatggtggtgattttggagat
acacccaatgatctcaatttttgtgtcaacggtctcgtctggccggacagatctccacat
ccagctctcgaagaggtgaaatattgctatcaacctttagggatacatattgatggcgat
gaaattgagatctggaacaagcgctcctttaccacttcagaagatctggcttttgaatgg
agtttatcaactgatggttcccttttgaaaagtggttcctggaatgtaccacctattgaa
cctagggagaagtacaggatgcctctaaacgctgggccttggtcttctctttgcgacgat
atattaggaagcgatgtggctttgactattacagctacacttgcaacatcaacgcgatgg
gcctgtgcaggacaggttgttgcgtcacaacaatgttttttaccttcaaagcagccttat
tcattacagacagtcaagttttcggatcctttgtctactgatatttccacgagcacggtg
gtagtcgcaatgcctcagcatagttgggagcttaaatttgacagaagtactggacgctct
tcttggaggctgggggacatgcttttgatgtccaaagggcctctcccttgcttttggagg
gctccaacagacaatgacaaaggtggtgacaagataagctacgcgtatcgatggaaggca
ttcgggttagaccgcctagcaatcactgggacaactggttttcaggcgaagcagctgtct
tctcatttagttttgttggagggggtgcttttcatagaaccagaatcagggagcggggac
gaaaagagggagatatcaataagatcgaaggaagatgggacagactggttcaaggtttca
gtgagctacatgatttacagcagcggcgacttcgttgcacagtataaagttgaagcaaat
ccgaggcttccgccgctaccaagggtgggcatcgttttctctataagcaacgagtgcaat
gcagcggagtggtatggacgaggaccgttcgagtgctatcccgatagaaaggcagccgct
caactgggaatctacaagcagaaggtgtctgacctccacgccccatatattgttcctggt
gagtgcggtggacgcgcagatgtgagatgggtggctttcaagaatgtcgagggagatgct
ggtctgtttgcgatgcctttccaaggaagtcctccaatgcaaatgagtgccagcaactac
agtacagaggagctggatagagcaactcatgaagaagagctgcatgctggacaggacatt
gaggtgcaccttgatcacaagcacatgggtttaggtggcgatgatagttggagtccctgc
gtccacgatgagtacctcgtcttaccacgaaattacgagtttgcggtcagattttcgccg
ttatctctagctgcgtcatcacaggagttataccgtcagcgactcttaccagagtaa
DBGET
integrated database retrieval system