Selaginella moellendorffii: SELMODRAFT_269342
Help
Entry
SELMODRAFT_269342 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_269342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_269342
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_269342
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_269342
Spliceosome [BR:
smo03041
]
Complex A
U1 snRNP components
U1 related factors
SELMODRAFT_269342
Complex B
SELMODRAFT_269342
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Helicases
SELMODRAFT_269342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ABC_C
Motif
Other DBs
NCBI-GeneID:
9656077
NCBI-ProteinID:
XP_002987999
JGI:
269342
UniProt:
D8SXE1
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSRYDGRYSDPSSYRDRKSYGGGSRKKDFDSMVLPKEQFDNLSPFEKNFYIEHPSVAALT
DDEVVDFRRRKDITVQGRNVPKPVRSFAEASFPDYVLQEVLKAGFKEPTAIQAQGWPMAL
KGRDLVGLAETGSGKTLAYLLPAIVHVNAQPYLAPGDGPIVLVLAPTRELAVQIQQESAK
FGSSSKIKSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEGRHTNLRRVTYLVLDE
ADRMLDMGFEPQIRKIVGQIRPDRQTLYWSATWPKDVEQLANQFLHDPYKVTIGSSSLKA
NHSIAQHVEVVNDYEKYQKLIKLLDEFMDGGKILIFMETKRGCDQVTKQLRMEGWPALSI
HGDKSQAERDWVLSEFKTGKSPIMTATDVAARGLDVKDIRYVINYDFPGSCEDYVHRIGR
TGRAGAKGTAYTFFTVSNAKHARELVSILSEAGQRITPELQSMVNCSRGFGGGVGFRDRG
RGFGRGPAQSGSNAVPLGSNRPWGR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctacgatggccgctacagtgatccatcctcgtaccgagaccggaaaagctat
ggcggtggaagccggaagaaggatttcgattccatggtcctcccgaaagagcagttcgac
aatttgtccccgttcgagaagaacttttacatcgagcatccatctgtggcagcgctaacg
gatgacgaggttgtggattttcggaggcgaaaggacatcaccgtccagggtagaaatgtc
ccaaagcctgtccggagttttgccgaggcttcatttccagactatgttctccaggaagtt
ctcaaagccggtttcaaggagcccaccgccattcaagctcaaggatggcccatggctttg
aaagggagggatctagtaggacttgcagaaacgggatctgggaaaactcttgcatacctt
ctacctgcaatcgtccatgtaaatgcacagccttatcttgcacccggcgacggtcccatt
gtgctggtgctagctcctacacgggagttggctgttcaaattcaacaagagtctgctaag
tttggttcctcgtcaaagatcaaaagcacttgcatttatggtggagctccaaagggacct
cagattcgtgacttgcaaagaggggtcgaaattgtcatagctaccccgggacgcctcatc
gacatgcttgaaggccgacatactaaccttcggagggtgacatatttggtgctggatgaa
gctgatagaatgctggacatgggctttgagcctcaaatcagaaagatagttggacagatt
aggccagaccgccagacgctttactggagcgcaacatggcctaaagatgtcgagcagttg
gctaatcaatttttgcatgatccctacaaggtgacaataggctcttcctctctaaaggcg
aaccattctatcgctcagcatgttgaagttgttaatgactacgagaagtatcaaaaactg
atcaagttgctggacgagttcatggatggaggaaagattctcatattcatggaaacgaaa
cgcggatgtgaccaagtaactaagcagctgcgaatggaaggctggccagctctctcgatt
cacggggacaagagccaggcagagcgcgactgggttctgtccgagtttaagaccggcaag
agcccgatcatgaccgcaactgacgttgcagctcgcggcctagatgtcaaggacatcaga
tatgtgatcaactacgacttccctggctcttgcgaggactacgtgcatcgcatcggaaga
acaggccgagctggtgcaaagggaacggcgtacacgtttttcaccgtgtcaaacgccaag
cacgccagggagctggtgtccattctctcggaggctgggcagcgtataaccccggagctc
cagtcgatggtgaattgctccagaggatttggaggaggagttggctttcgtgatcgaggc
cgcggatttggaaggggccccgcgcaatctggatcgaatgctgttcctctaggcagcaat
cgtccctggggtcgatag
DBGET
integrated database retrieval system
