KEGG   Selaginella moellendorffii: SELMODRAFT_269750
Entry
SELMODRAFT_269750 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12602  WD repeat-containing protein 61
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_269750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_269750
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     SELMODRAFT_269750
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_IFT140_1st Nbas_N Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_DCAF12 Beta-prop_DCAF4 eIF2A Beta-prop_SCAP BBS2_Mid B-prop_COPA_B_2nd Lactonase Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 9634449
NCBI-ProteinID: XP_002991116
JGI: 269750
UniProt: D8T680
LinkDB
Position
Unknown
AA seq 307 aa
MKLVSIKSLANAHGDGVWAVAWAAATGDRPAVLLTGSADESVKVWKGDELDLERTNSGNS
LGVVAVAASPDGRVAACTSLDSVVRIFDVDSNSTLATLESKPAEAWQMQFHPKGELLAVA
GGGSGCVNIWKASSGSRETSLKAESVDKVGGGKFVLSVAWSPDGKLLACSSMDGTIAVFD
VARGKMLHTLDGHSMPVRCLAFSPVEPRYLFTACDDKHVHMYDAEGRSLVSAMSGHASWV
LSVAGSPDGAALASASSDRTVRLWDLKTRSCVQSLTEHKDQVWGVAFRPGRLATVADDRS
ICLYDYA
NT seq 924 nt   +upstreamnt  +downstreamnt
atgaagctcgtgagcatcaagagcttggccaacgcgcacggcgatggagtgtgggcggtg
gcgtgggcagcagcaaccggcgatcgtccagcagtgctgctcacggggtcggcggacgag
agcgtcaaggtgtggaagggcgacgagctggacctggagcggaccaacagcggcaactcg
ctaggtgtggtggcggtggcggcgagcccagatgggagggtggcggcatgcacgtccctg
gacagtgtggtgcgcatcttcgacgtggactccaacagcacgctggcgacgctggagagc
aagcccgctgaggcgtggcaaatgcagttccatcccaagggggagctgctggcggtggct
ggcggagggagcggctgcgtcaacatctggaaggcgagcagcgggagccgggagacgagc
ctcaaggcggagagcgtggacaaggtcgggggtggcaagttcgtgctgtcggttgcatgg
agcccggatggcaagctgctggcgtgcagctccatggacggcaccatcgccgtcttcgac
gtggcccggggcaagatgctgcacacgctcgacggccactcgatgccggtgcgctgcctc
gccttctcgccggtggagccgcgctacctcttcaccgcctgcgacgacaagcacgtccac
atgtatgatgccgaggggcggagcctggtgagcgccatgtcgggccacgcgagctgggtg
ctgagcgtggcggggagcccagacggcgccgcgctcgcctccgcgtcgagcgaccggacg
gtccgcctctgggacctcaagacgaggagctgcgttcagagcctgacggagcacaaagat
caggtgtggggcgttgccttccgcccgggcaggctggccaccgtcgcggacgaccggagc
atttgcctctacgactacgcctga

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