Selaginella moellendorffii: SELMODRAFT_270329
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Entry
SELMODRAFT_270329 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
smo
Selaginella moellendorffii
Pathway
smo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SELMODRAFT_270329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smo03000
]
SELMODRAFT_270329
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_270329
Transcription factors [BR:
smo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SELMODRAFT_270329
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SELMODRAFT_270329
RNA polymerase III system
TFIIIB
SELMODRAFT_270329
RNA polymerase I system
SL1/TIF-1B
SELMODRAFT_270329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
9662239
NCBI-ProteinID:
XP_002962577
JGI:
270329
UniProt:
D8QVD4
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MAQILEGTEPVDLAKHPSGIIPTLQNIVSTVNMDCKLDLKTIALHARNAEYNPKRFAAVI
MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVGS
CDVKFPIRLEGLAYAHGHFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEI
YEAFENIYPVLTEFRKMQQ
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattctagagggcactgagccggtggatcttgccaagcatccgtctgggatc
attccgaccttacagaacattgtctcgaccgtgaacatggattgtaaactagatctgaaa
accattgctcttcacgcgaggaatgctgagtataaccccaagcgtttcgcagccgtgatc
atgagaataagggagcccaagacgacagcgctgatttttgcgtcgggaaagatggtttgc
actggagccaagagcgaacaacaatcaaagctcgcagcaagaaagtatgctcgcatcatc
caaaagctgggattccccgcacagtttaaagattttaagatccagaacattgttggctcc
tgtgacgttaagttcccgatcagattggagggcctggcgtacgctcacggtcacttctca
agctacgaaccagagctgttccccggattgatctaccgaatgaagcagcctaagatcgtg
ctcctgatcttcgtctctggaaagattgtgcttactggtgcaaaggtccgggatgagatc
tacgaagcattcgagaacatctacccggtgctgaccgagtttagaaagatgcagcaatga
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