Selaginella moellendorffii: SELMODRAFT_270401
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Entry
SELMODRAFT_270401 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K02731
20S proteasome subunit alpha 4 [EC:
3.4.25.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
SELMODRAFT_270401
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smo01002
]
SELMODRAFT_270401
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_270401
03051 Proteasome [BR:
smo03051
]
SELMODRAFT_270401
Enzymes [BR:
smo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
SELMODRAFT_270401
Peptidases and inhibitors [BR:
smo01002
]
Threonine peptidases
Family T1: proteasome family
SELMODRAFT_270401
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
SELMODRAFT_270401
Proteasome [BR:
smo03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
SELMODRAFT_270401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
9654236
NCBI-ProteinID:
XP_002964303
JGI:
270401
UniProt:
D8QYL1
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MSSGRYDRAITVFSPDGHLFQVEYAQEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDAR
TVHKILSLDEHVALAFAGLTADARVLVNRARVECQSHRLTVEDPVTVEYITRYIAGLQQK
YTQSGGVRPFGISTLIIGFDPHTGAPSLYQTDPSGTFSAWKANATGRNSNSVREYLEKNY
TETSGMDTVKLAVRALLEVVESGGKNIEIAVMTRQGLKLLEEPEIEEIVNGIEAEKAAAE
AAKKGPPRDS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgggcgctacgacagggcgatcaccgtcttctcgcccgatggccatctcttc
caggtggaatacgcacaggaggccgtgcgaaagggcaacgccgccgtcggcgtccgcggc
actgacacgatcgtgctcggcgtggagaagaaatccaccgccaagctccaggacgcgagg
acggtgcacaagatcctgagcctcgacgagcacgtcgccctagctttcgctggcctcaca
gccgacgccagggtcctggtgaaccgggcgagagtggaatgccagagccacaggctcacg
gtggaagatccagtcacggtggagtacatcacacgctacatcgcggggctccagcagaag
tacacgcagagcgggggagtgcggccattcgggatctcgacgctcatcatcggcttcgat
ccacacactggagctccatcgctctaccagacggatccgtccgggaccttctcggcgtgg
aaggcaaacgcgacgggcaggaactccaactcggtgcgcgagtacctggagaagaactac
accgagacatcgggcatggacacggtgaagctggctgtccgagctctcctggaggttgtg
gagagcggtggcaagaacatcgagatcgctgtgatgaccagacaaggactgaaattgctg
gaggagcccgagatcgaagagattgttaacgggatcgaggccgagaaggctgctgccgag
gccgcgaagaaaggtccgcccagagattcttaa
DBGET
integrated database retrieval system