KEGG   Selaginella moellendorffii: SELMODRAFT_270661
Entry
SELMODRAFT_270661 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14408  cleavage stimulation factor subunit 3
Organism
smo  Selaginella moellendorffii
Pathway
smo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SELMODRAFT_270661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_270661
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     SELMODRAFT_270661
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_14 HAT_Syf1_CNRKL1_C TPR_19 HAT_Syf1_M Iml2-TPR_39
Other DBs
NCBI-GeneID: 9630970
NCBI-ProteinID: XP_002967676
JGI: 270661
UniProt: D8RA86
LinkDB
Position
Unknown
AA seq 790 aa
MINDGKLFKAQIPERSLLAAPADGAAAAAADSSSPSPSGSSRRSVFSHLGPPASDKERAA
RERIDAQKYDVEAWEILADEAQSRPIAHATGIFELLVSTFPTAGKFWKMYAEAMIKASND
DAVRHIFSRCLLSCFHLELWKCYIKFIRRVNEQKGPESKEETRKAFEFTVGHVGMDISAG
PLWFEYITFLKTMPISSPQEEAQRMLLLRKAYQQAVLSPIHHIEQLWKEYESFENTISRA
LAKGLVADFQPKHFNARAVYRERKKFWDQIDQSLLPVPFAGSFKEEQQNSSWKQLLAFEK
NNPQRLEPALLARRVVFTYEQCLMYFYHYPDIWYDYAMWLAQNGSNDNAAVVFGRALIAL
PDATIIYYAYAEFEEARGSIKDAKKIYETLVSHEKIANSLAHIQLMRFVRRTEGIEAARK
VFSEARKSPSCTYHLYVACAVMVFCVDKDPKVARDIFELGLKKYIHEPSYVTEYADFLCR
LNDDRNVRALFERALNVLPAEESVEVWNRFLAFEQMYGDIPSMLKVAQRRKEALTGDDGV
AVASSESSMQQLISRYRFLDLWPCSSQDLDHLAQQQIMLQKLEEKQLAIGNVQGAKKSQN
SVATPPKNLIRPDVSQMTPYDPKPAGNDALVLSGLGLQGSTAMPGLASRAGLGRGPADDS
SMEELLRLLPPAVKTFLSQLPPVDGPIPDVDLVISILLENEVPNPTGPNGSTKSAAATSG
RAGRHAKRKDLEAQEEDDAALQSQAAQSGPKDVFRMRQLQRSRAVSNASAKRLQQSSTSS
GLSAEKSVSN
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatcaacgatggaaagctcttcaaagctcagattcctgagagatcgctgctggcagct
ccagctgatggcgccgccgccgccgctgccgattcttcctcgccgtcgccgtctgggagt
tccagaagatcggtgtttagtcatctagggcctcccgcgagtgacaaggagcgcgcagct
cgagagcgaatcgatgcacagaagtacgatgtggaggcgtgggaaattcttgcggatgag
gcccagtctagaccgattgctcacgcgacgggaattttcgagctactcgtttctaccttt
ccaactgcggggaagttctggaagatgtacgcggaagctatgatcaaggcgagcaacgat
gatgcggtccggcatatctttagccgttgtttgctcagctgcttccatttggagctatgg
aaatgctacatcaagtttattcgcagagtgaatgaacagaaaggccctgaatcaaaagag
gaaacgaggaaagctttcgagttcacagtcggtcatgttggaatggacatatcagcagga
cctttgtggttcgagtacatcacattcctgaaaacgatgcccatttctagtcctcaggaa
gaggctcagcgaatgctcctgctccgcaaagcttatcagcaagctgtactctccccgatc
catcacattgagcaactgtggaaagagtatgaaagcttcgagaacaccatcagccgggca
ctggcaaaaggacttgtggccgacttccagccaaagcacttcaatgctcgtgctgtctac
agggaacgaaagaagttctgggaccaaattgatcagagtttgctaccagttccttttgcc
ggttctttcaaagaagaacaacaaaattcttcgtggaagcaacttcttgcgtttgaaaag
aacaatcctcagcggttggagcctgctcttttggctagacgtgtggtgtttacttatgag
caatgccttatgtatttttaccattacccagatatttggtatgattatgcaatgtggctc
gctcaaaatggatcaaatgacaatgctgccgtagtttttgggagagctctcattgccttg
ccagatgcaacaatcatctattatgcttacgcagaatttgaagaagctagaggctccatc
aaggatgcgaagaagatttatgaaactcttgtgagtcatgaaaaaatagcaaattccttg
gctcatatacagctgatgcgcttcgtgaggagaaccgaaggcattgaggccgctcgcaag
gttttttccgaggcacgaaagagtccttcctgcacatatcatctttacgtggcgtgtgcc
gtgatggttttctgcgttgacaaggacccaaaggtagcgcgagacatatttgagttagga
ttgaaaaagtacattcatgagcctagttacgtgacagagtatgctgactttctttgtcgt
ctaaacgacgacagaaatgtgcgagcactttttgagcgtgctctgaatgttcttccagca
gaagagtccgtagaagtatggaatcgatttttggcgtttgaacaaatgtatggtgacatt
ccgagcatgctgaaggtggcacaaagaaggaaagaagctttgactggagatgatggtgtc
gcggtagcatcctcagaaagctcgatgcagcagctaatatctcgttaccgctttttggat
ctctggccttgttcatcacaggatctcgaccacctcgcgcagcaacagattatgttgcaa
aagctggaagagaaacagttggctattggtaacgtacaaggcgcgaagaagtctcagaac
tccgtagcgacacctccgaagaacttgattcggccagacgtatcgcaaatgactccgtat
gatcccaagccagcgggaaatgacgcccttgtgctgagtggtctgggacttcaaggttct
actgctatgcctggattggcctctcgtgcgggtcttggacgaggtcctgcggatgattct
tcaatggaagagctcttgaggctcttaccaccagcagtaaaaacgtttcttagccagctt
ccacctgttgatggacccattcccgatgtagacctggtgatatctattctactcgagaat
gaagttcccaatcccacgggaccaaacggaagcacaaagtccgcagctgcaacatcagga
agagctggacgccacgcaaaacgcaaggacctcgaagctcaagaagaagacgacgcagcg
ttacagtcccaggcagctcaaagtggtccgaaggacgtgttccggatgcgccagctccag
aggtcgagagccgtgagcaacgccagcgccaaaaggctacaacagtcgtccacttcgagc
ggcttaagcgccgagaagtctgtaagtaattga

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