Selaginella moellendorffii: SELMODRAFT_38954
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Entry
SELMODRAFT_38954 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08336
ubiquitin-like protein ATG12
Organism
smo
Selaginella moellendorffii
Pathway
smo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
SELMODRAFT_38954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_38954
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_38954
03029 Mitochondrial biogenesis [BR:
smo03029
]
SELMODRAFT_38954
Membrane trafficking [BR:
smo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
SELMODRAFT_38954
Ubiquitin system [BR:
smo04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
SELMODRAFT_38954
Mitochondrial biogenesis [BR:
smo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
SELMODRAFT_38954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APG12
DUF7294
Motif
Other DBs
NCBI-GeneID:
9642526
NCBI-ProteinID:
XP_002971091
JGI:
38954
UniProt:
D8QRI3
LinkDB
All DBs
Position
Unknown
AA seq
86 aa
AA seq
DB search
ALAVKVQFVSTGGAPVLIQSEFKIDATEKFAKVLKFLRRQVQQDNVFPFINQAFIPSQDE
PVGDLYKNFGVHGKLIVNYAPTLAWG
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
gcgctcgcagtgaaggtccaattcgtttccacgggaggtgcgccagtgctgatccagtcg
gaattcaagattgacgcgacggagaaattcgcgaaagttctcaagtttctgcggaggcaa
gttcaacaggacaatgtgtttccattcatcaatcaagcatttattcccagccaagacgag
cccgtgggagatctctataagaactttggcgtgcacgggaagctcatcgtaaactacgct
cccactctggcgtggggctaa
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integrated database retrieval system