Selaginella moellendorffii: SELMODRAFT_402172
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Entry
SELMODRAFT_402172 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_402172
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_402172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
9633535
NCBI-ProteinID:
XP_002960137
JGI:
402172
UniProt:
D8QPU0
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MVAPGGKHKRFFEVGDSDENKSDEGPKKQRKELDPDVEKRLIEAKVKALPQSNENTDTIK
PKIRKYNRGERLSVKGLKDKKLKSQLKTKEDLFEKSALTAAKVEQWLLPSEGGALEADDG
ENTYDYTQEDIVKNVDISSAHKAFDLRLPDLGPYTIDYTHSGRYALIGGRKGHLAVIDWK
TKYLMMETQVKETTRDIKFLHNEQFFAAAQSKYIYIYDKKGAEVHCLKEFVAPLKLEFLR
HHFLLVSTNKAGVLHYQDTSTGQIVANYSTRLGPCRVLRANPYNAVVSLGHSNGTVTLWT
PNMGTPLVRMLCHRGAVTSTAFDMGGSYMVTAGADARIKVWDIRKMQALHSYMAFQSTKS
LDVSQKGLLAVGSGSTIEIWKDAFQVKQEKPYMKHKLFQNSTIQDLSFCPYEDVVGIGHT
GGVTSILVPGSGEPNFDSFVANPFQTVKQRHEAEVHALLDKLQPQTIMLDPQKFGAVDKN
PRKNLREQEEEEDESKKIQGQKKAKRKTKGRNKVGKRMAKKQLEAFGTKRSIIREQQQQQ
KQMKGALVKEREEPLPRALERFAS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcctggcggcaaacacaagcgcttcttcgaggtcggcgatagcgatgagaat
aaatcggatgaggggccgaagaagcagcgcaaggaattggatcccgacgtcgagaagcga
ttgattgaagccaaagtgaaagcacttccccaaagcaatgagaacaccgacactatcaag
ccgaaaatcaggaaatacaatcggggagaacgactctccgtgaaaggattgaaagacaag
aagctcaagtctcagctcaaaaccaaagaagatttgtttgagaaatctgctcttacagcc
gcgaaagtagagcaatggcttctaccgagcgaaggtggagctttagaggcggacgatgga
gaaaatacctatgactacactcaagaagacatcgtgaagaacgttgatatttcaagcgcg
cacaaagcatttgatctcagacttccagacttgggtccttacacgatagattacactcac
agtggtcgatatgcgcttattggcggccggaaaggacaccttgccgtgatcgattggaaa
actaagtatctcatgatggaaactcaagtgaaagagactacacgcgatatcaagttcctg
cacaacgagcagttttttgctgctgctcagagcaaatatatttacatctacgataaaaag
ggcgctgaagtccactgcctaaaggaatttgtagctccactgaaactggagttccttcga
caccactttctcctagtcagcaccaacaaggccggagtccttcactaccaggacacaagc
acgggtcagatagtggcaaattactctacgagactgggaccttgccgtgttcttcgagcg
aatccttacaatgccgttgtgagcctgggccacagcaacgggacagtgactctgtggact
ccaaacatgggtacacctttggtgaggatgctgtgtcacagaggcgctgtgacttccacg
gcattcgacatgggagggagctatatggtaacagcaggcgcagacgcgaggatcaaagtc
tgggacatacgaaagatgcaggctcttcattcctacatggcgtttcagtcgaccaagtca
ctagacgtaagccagaaaggcttgctcgcggtcggcagtggctccacgatcgagatctgg
aaggatgcgtttcaagtcaagcaggaaaagccatacatgaagcacaagctcttccagaac
tcgaccatccaggatttgagcttctgtccatacgaagacgtggttgggattggtcacaca
gggggagtgacatccattctcgtccccggctcgggagagccaaacttcgacagcttcgtg
gcgaatcctttccagacagtgaagcagcggcacgaagcggaggtccacgcgctcctggac
aagctccagccgcagacgatcatgctggatcctcagaagtttggagcggtggacaagaac
ccccggaagaacttgcgggagcaggaagaagaggaggacgagtcgaagaagatccaaggc
cagaagaaggccaagcgcaagaccaaaggccggaacaaagttggcaagagaatggcgaag
aaacaattggaggctttcggcacgaagcgatcgataattcgcgagcagcagcagcagcaa
aagcaaatgaaaggagctctcgtgaaggaacgagaggagcctttgccacgagcgctcgaa
cgctttgctagctag
DBGET
integrated database retrieval system