Selaginella moellendorffii: SELMODRAFT_402621
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Entry
SELMODRAFT_402621 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_402621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_402621
Spliceosome [BR:
smo03041
]
Complex A
U1 snRNP components
U1 related factors
SELMODRAFT_402621
Complex B
SELMODRAFT_402621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
Motif
Other DBs
NCBI-GeneID:
9632041
NCBI-ProteinID:
XP_002961039
JGI:
402621
UniProt:
D8QMI0
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSNVPPPMSSQAAYPPPMQMRPNQASGPFAQPQRPPQGPPGMYGSAVPFPQQGNAYPGSY
QVGNPGQLLQSYPVNAGQTNNGMAQGLHSGVPPPGSRASEWQEHFSPDGRRYYYNKRTKQ
SSWEKPDELMTPTERADASTVWKEFVTADSRKYYYNKLTRQSTWTMPEEMRVAREQADRG
YMGVAKMETAPAPVAQTLTPAATGTPSPAPLAGSGADVAEATEETQQTQQDLEVGSKCGF
LCILRFEYPQEAKKSLPSIELLEAMHVQSDWTWDQAMRVIINDKRYGALKSLGERKQAFN
EYLAQRKKLDLEEKRLKQKKAREDFIKMLEESKELTSAMRWSKVVSLFESDPRFHAVDKE
REREDLFDDYLLDLERKERDKAREEKKKSRADFRSYLESCDFIKVNSHWRKIQDKLDDDE
RWSRLDKMDRLEVFQEYIRDLEKEEEEEKKMQKEQIRRKERKNRDEFRSLLESHKAAGIL
VARCPWRDYLAKIKEHPAYQAICTNLSGSTPKELFMDVLEELDKLYLEDKAKIKEIMKVG
KITVVPTTTYDDFKAALAEAGDLTAISELHIKLAFEDALERLKEKEEKEAKKRRRLAEEF
STLLRSNKVSGDRLAGKETVEFRAIDDEVVLRKLFDEHVAHLQQKLKEKDRKREKEEKKD
KDKDSKDDKDKERKKDKSSKKDRNEDGEPALSKEEKKKDKDRDRDKEKRHRRRHRSASSD
DGSDRDDRDEARKSRKHGHEHRRSSRRHGHDSDSDAEAKPKRQKRERRSTEELEDGEILG
LHSWSCLFVDRLRGSGFWY
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtcccgccccccatgtcttcgcaagctgcctatcctcccccaatgcaaatg
cgtcccaatcaggcctctggtcctttcgctcagccacagagacctcctcaaggacctcct
ggaatgtatggatctgccgttccctttcctcaacaaggcaatgcgtatccaggctcttat
caggtcgggaatccgggtcagcttcttcagtcttatccagtaaacgcaggacaaactaac
aatggtatggcacaaggtctgcattcgggcgtaccacctccaggatccagagcttctgaa
tggcaggagcatttttctcctgacgggagaaggtattattacaataagcggactaagcag
tcgagctgggaaaagccagacgagttgatgactccgaccgagcgagctgatgcttcaact
gtttggaaagagttcgtgactgctgatagcagaaaatattattacaacaagttgacgagg
cagtctacatggacaatgcccgaggaaatgagagtagctcgcgagcaggcggataggggg
tatatgggagtcgctaagatggaaactgctcccgctcctgtagctcagaccctcacccct
gccgctacaggaaccccgtctccagcgcctcttgcagggtctggcgctgacgttgctgag
gctaccgaggagacacaacagacacaacaggatctggaggtaggcagtaaatgcggtttc
ttatgtattctgaggtttgagtatcctcaggaagcaaaaaaatcgttaccatcgattgaa
cttttggaagccatgcacgttcaatccgattggacgtgggatcaggctatgcgcgtaatt
ataaatgacaaacggtatggtgccttgaaatctttaggtgaacgcaagcaagctttcaac
gagtatcttgcgcaaagaaaaaagttggatcttgaagaaaagcgtttaaaacaaaagaaa
gcacgtgaagattttataaagatgttggaagaatccaaggagttgacatcagccatgcgt
tggagcaaggtcgtatctctttttgaaagtgacccacgttttcatgccgtggataaagag
cgagagcgtgaagatctttttgacgactatttgctggacctggagcgcaaagagcgagac
aaggctcgggaggagaaaaagaaaagtcgcgcggacttcagaagttacctcgagtcctgt
gattttattaaggtaaattcccattggaggaaaattcaggataaactcgatgacgacgag
cgctggagccgattagataaaatggaccgcttagaagtctttcaggaatatattcgtgat
ttggaaaaggaagaggaagaagaaaagaaaatgcaaaaggaacaaatacgccggaaagag
cgtaagaatcgggacgagtttagaagtctcttggaatctcacaaagcagcaggaatattg
gttgcaaggtgcccatggcgagactacttagctaagatcaaagagcatcctgcttatcag
gcaatatgtactaatctgtcgggttcgacaccgaaggaactttttatggatgtcctggag
gagcttgacaagctgtatctcgaagacaaggccaagatcaaagaaatcatgaaggtcgga
aagattacggtggtaccgacaaccacttacgacgatttcaaggctgcactagccgaggca
ggtgacttgacggcgatatctgaactgcatataaagctagcttttgaagacgctctcgaa
cgactaaaggagaaagaagaaaaggaggctaagaaacggcgacgcttagctgaggagttc
tctactctactccgatcaaacaaggtttccggtgatagattggctgggaaagagacggtg
gagtttagggctattgatgacgaggtggtgctgagaaagcttttcgatgagcacgtagct
catttgcaacagaaactcaaggaaaaagatcgcaagcgagagaaggaggaaaagaaggac
aaagataaagacagtaaagacgacaaagataaggagcggaagaaagacaagagcagcaag
aaggatcgtaacgaggatggtgaaccagcgctcagtaaagaagaaaagaagaaggacaag
gacagggaccgtgacaaagaaaaaaggcacagaaggcgtcacaggagcgcaagcagcgac
gatggatccgacagagatgacagggacgaggctaggaaatcccggaagcatggacacgag
cacagacgatcttcaaggaggcatggccatgactctgattctgatgccgaggccaagccg
aaacggcaaaagcgggagcggcggagcaccgaggaactggaggacggggagatcttgggc
ttgcattcgtggtcttgcctgtttgtcgataggcttcgtggttctggattctggtactga
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integrated database retrieval system