Selaginella moellendorffii: SELMODRAFT_404193
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Entry
SELMODRAFT_404193 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_404193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_404193
Spliceosome [BR:
smo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SELMODRAFT_404193
Complex C
U4/U6.U5 tri-SnRNP related factors
SELMODRAFT_404193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
9660788
NCBI-ProteinID:
XP_002962424
JGI:
404193
UniProt:
D8QUJ9
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MANRTDPAAKSVHGTNPQNLVEKILREKIHQSSFWKEQCFALTAETLVDKAMELDHIGGT
YGGNRKATPFMCLTLKMLQIQPEKEIVVEFIKNQDYKYVRVLGAFYLRLVGKATDVYQYL
EPLYNDYRKIRQRSADGSFFLSHVDEFIDQLLTTDYCCDITLPRVPKRSVLEQNNQLEPR
KSALEDDFEEEEEKDEEEGELELTNEDKALENDRERERERDRRGTEIETGTGIEIADVGA
GVEAGNAGSEGTTAQGERTNNGHPRATRRRRKTQNRKRTPRSWRPTSSEPSLD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggacccggcggccaagagcgtccacggcaccaatccacagaacctg
gtggagaagattttgcgcgagaagatccaccagagctcattctggaaggagcagtgcttc
gcgctgacagccgaaaccctggtagacaaggcgatggagttggatcacattggaggaact
tacggcggcaacaggaaggcgacgccgttcatgtgcctcacgctcaagatgctccaaatc
cagcccgagaaggagatcgtcgtggagtttatcaagaaccaagactacaagtatgtgaga
gttttgggagcgttctacttgcgactcgtgggcaaagccacggacgtgtatcaatacttg
gagcctctctacaatgactatcgcaagatcaggcagaggagcgctgatggaagtttcttc
ctctcccatgtcgatgagtttatcgaccagctcttaaccacggactactgctgcgatatc
actcttcctcgagttcccaagaggtcggtgctcgagcagaacaatcagctggagccgcgg
aagagcgctctagaggacgactttgaggaagaagaggagaaggacgaggaagaaggagaa
ctcgagcttacaaacgaagacaaggcattggaaaacgatcgtgaaagagaaagagaaaga
gaccggagagggacggagatagagaccgggacagggatagagatcgcagacgtaggagcc
ggagtagaagcagggaacgcagggagcgaagggacgacagctcaaggcgaaaggacgaac
aacggccacccgagagcgacaagaagaagaagaaagacacaaaaccggaagaggaccccg
agatcgtggaggccaacaagctccgagccaagcttggattga
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