Selaginella moellendorffii: SELMODRAFT_404572
Help
Entry
SELMODRAFT_404572 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10691
E3 ubiquitin-protein ligase UBR4 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_404572
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_404572
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
SELMODRAFT_404572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
E3_UbLigase_R4
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
9661369
NCBI-ProteinID:
XP_002963041
JGI:
404572
UniProt:
D8QVR9
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MALPRASTLKPGERNTFLRSLEYCGLRSSEYADHGFMLRDHLPLRRISPVKEIILVNLLK
VISPDLPLAFALSRGWTTKQKLASRLTETYADCDATSADEDDDEGTSDGELTSLDREHDE
DFLLLEFAPSHQVGAVLWSSTVSKGCCSVCAKCLKPYSITDIESSKRLSLETALELKDPH
RPAPMHIKQSQMENVGARHPVIAEHIILPALRIISQACTPPKTDIPQTTEPGGFSVKSVG
SFVKTAAILQETPVTRPAKENVEKDKELENTPKGQDLLLVNYLEWKNGATYVDFVRRLTI
SQNVKPAQKSQKDSRKSDALALKYILRWKRKACKVALTEDLKCFEDSSWVPNSSRDVRFD
RGAVLSERSSEIQVPGPVCEPASRTAGESAAEYFDLLFKMIEDEDARLYLTVRGFLRTAC
SLISEEVVRVEAQERSFHTDISQGYTLHKLIELLNKFLQVPNVRIRFMKEDLLSQILEAL
LVIRGLVVQKTKLISDWTESDDNKRHFVRACISGLQTPDHDRKDRICLFILEQLCNIICP
AKPEPAYMLVLNKAHTQEEFIRGSMTKNPYSSLEVGPLMRDVKNKICQQLEMIALLEDDY
AMELLVAGSIISLDLSVAQAYEQGLDGEATEPMIKELDDDREESQDPEIEFAITGVMKDS
GGLKELLSMVEHFTDEELKSGQEQVALVLKLLMFCCKIRGNRQALLQLGALDVLLETANK
SFFSAESVERLLLIVECLVTEANESDVGVTEGALSTTRAGIARGEQAAKGVLMFLERLSN
PSSYKQSKQHKNSDTAARILPYLTYGEEAAMEVLVDHFLPYLLDWGAFDKLQKEHGENPK
DASLGQKAAFHQFAVENFVKVTESIKQNDSGELLKNLILEKEILTVAIRYLKDAFPFTEK
KTDLRSSPEWTRSLELPSVPIILSMMRGLSIGHCKTQECLDEEEVLPLLHALEGMPGENE
IGARAENLLDTLSDKEKGFLAETILNLRETTRDEMRRRALQRREELLQGLGMRRELRSDG
GERIVISKPRIEGLEDVEEEEAGLACMVCREGYKLRMLGAYSYSKRVKIGSATVHGRPEW
VYTTCHQEEKRADASLKNPKKEWEGAAIRNNETLCNDLFPLRGPAVALAQYSRCVDTFWD
NLNALGRADGSRLRLLSYDIVLMLGRFATGASFSVDSKGGGKESNSRLLPFMVQMAGHLL
DQQGPSQRRVLAKSLQTFLQASPPETDATTTPVSRTISSPGTPARSNETVQYMMVQSLLL
QSHDEWQQHRKTFLQRGAVHAYMLHKQGFSSFCLDIAIPSGQEPDRVCSELQPAADIKRT
ASSGGLQATSTPSLSSEQLFIILQPMLVFIGIIDQLQRFFKSRSGSAVSSGSSSSAGGTT
NDGTEAWEATMKEKLRDVSAMLAFSKDLLEWLEDMQSSADLQEALDVMGALGDAFSAGFS
SCDEFFRDALGLASL
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaccacgcgccagtacgctgaagccaggagaacgaaatacattcttacggagc
ctggagtactgtggtttgcgatcatcggaatatgcagatcatggtttcatgcttcgtgac
cacctcccactacgaagaatatctcctgtgaaggaaattattcttgtcaacctgctcaaa
gtcataagccccgacttgccactcgcattcgctctatccagagggtggaccacgaagcag
aaactcgccagtcgccttacagaaacgtatgccgactgtgatgctacctctgccgacgaa
gacgatgacgaggggacatctgatggtgagctaacaagcctggatcgagagcacgacgaa
gacttcttgcttctagagtttgcaccttcacatcaagtgggagcagttttatggagcagc
actgtgtccaagggatgctgctcagtatgtgcaaagtgcctcaagccatacagtatcacc
gatattgagtcgagcaaaaggctttcacttgaaacagcactcgaattgaaagaccctcac
agaccagctccaatgcacatcaaacaatctcagatggagaacgttggagcgcggcatcca
gttattgccgagcacatcattcttccagctttgagaattatttctcaggcatgcactcct
ccaaagactgacattcctcagactactgaacctggagggttctcggtgaagtctgttggt
tctttcgtgaagacggctgcaatacttcaggagacaccggtcaccaggcccgccaaggaa
aacgtagagaaagacaaagagctggagaacacaccgaaaggccaggatttactactagta
aactacctggagtggaaaaatggtgcgacgtatgttgatttcgtgagacgactgaccata
tctcagaacgttaaacccgctcaaaaatctcaaaaagactcgagaaaatctgatgccttg
gctcttaaatatattctacgatggaagcgaaaagcttgcaaagttgctcttaccgaggac
ctcaagtgctttgaagatagtagctgggttcccaattcgtcaagagatgtgcgctttgat
cgaggtgctgtgctctcagagcgtagctcggaaatccaagttcctggacctgtttgtgaa
cctgcttcgagaactgccggagagagtgcagcggaatactttgatctgctgttcaaaatg
atcgaggatgaagatgcgcgcttatatcttacagttcgtggctttctgcggaccgcttgc
agtcttatcagtgaagaggtagtccgggtagaagcccaggagcgaagcttccatacggac
atctcacagggctatactctacacaaacttatcgagctactgaacaaattcctgcaagtt
ccgaacgttaggataaggtttatgaaggaagacttgctgtcacaaattttggaagctctt
ttggtgatcagaggtctggttgttcaaaagacgaagctgataagtgactggacggaaagc
gacgacaacaagagacatttcgttcgtgcatgtatttccggtcttcagactcctgatcac
gacagaaaagatcgcatatgtctgtttattcttgaacaactctgcaatatcatctgtccg
gccaaaccggagcctgcatatatgcttgttctcaacaaagctcacacgcaagaggagttt
atccgtggctcgatgacgaagaatccatactcgagcttagaagttggtccacttatgcgt
gacgtgaagaacaaaatctgtcaacagctggagatgattgcacttttggaggatgactac
gccatggagcttcttgttgcaggaagcatcatctctttagatctcagtgttgcgcaggca
tatgagcagggactggacggtgaggcaacagaaccaatgatcaaggagctagatgatgat
agagaggaaagtcaggatccagaaatcgagtttgcaattactggagtcatgaaagatagc
ggtgggctgaaggagctactgagtatggttgagcattttacggacgaagaactgaagtct
ggtcaggaacaagttgcgttggttttgaagctactcatgttttgctgcaagattcggggt
aaccggcaggctcttcttcagcttggtgccttggatgttctcctggagacggccaacaaa
tccttcttttcagccgaatctgtggagcgactgctactcatcgtggagtgtctggtcacc
gaggccaacgaaagtgacgttggagtgaccgaaggcgctctgagcacaacaagagccggc
attgccagaggggaacaagctgccaagggtgttctaatgttcctggagcgactctccaat
cccagcagctacaagcagtctaagcagcacaagaacagtgacacagccgcaagaatacta
ccgtatctaacttatggagaggaagcggcaatggaagtattggtggatcacttcctgcct
tacttactggactggggagcttttgataagctgcaaaaggagcacggtgagaatccgaag
gacgcttcactgggtcagaaagcagcctttcatcagttcgctgttgagaattttgtgaag
gtaacggagtcgatcaagcaaaacgacagtggcgagctacttaaaaatctcatacttgag
aaggagatactgactgttgccatacggtatctgaaagacgcgtttccttttactgaaaag
aaaacagatcttcggtcgtcacccgagtggacacgatctttggagcttccatcggttccg
attatcctgtccatgatgagaggattatctatcggtcactgcaagactcaagaatgtctt
gacgaggaagaagttcttcctctgctccacgcactggagggcatgccaggagaaaacgag
attggagcaagagcagaaaatttgctggacacgctatccgataaagagaaaggattcctt
gccgagacgatcctgaatttaagggagacaacacgggacgagatgagacgacgtgctttg
caacgaagggaagagttactacaggggctgggaatgcgccgagagctgagatctgatgga
ggtgagcgcattgtcatatcaaagcctcgaattgaaggccttgaagacgtagaagaggaa
gaagccggactggcatgcatggtttgtcgggaaggctacaaactgcggatgctgggagct
tactcgtacagcaagcgtgtaaaaatcggttctgcgactgtccacggccgtcccgagtgg
gtctacacgacgtgccaccaagaggaaaagcgagccgacgcctccctcaagaatcccaaa
aaggagtgggaaggcgcagctatacgcaacaacgagacgctgtgtaacgatctctttcct
ctccgcggcccagcagtcgcgcttgcgcagtactctcggtgcgttgatactttctgggac
aacttaaacgccctcggacgtgcggatggtagccggctgcgcttgctctcttacgatatc
gtcctgatgctgggccgctttgcaacgggggcctcgttcagtgtcgatagtaaaggtggt
ggcaaggaaagtaactcgaggctcttgcctttcatggtacaaatggccggacatctcttg
gaccagcagggaccgagccaacgccgtgttctcgcaaaatccttacaaacgttcctccag
gcatcgcctcccgagactgacgccaccactactcctgtttcgagaaccatctccagcccc
ggcacgccggccagatcgaacgagacagtgcagtatatgatggtccagtcgctgctgcta
caatcccacgacgagtggcaacagcacaggaaaacgtttctccaacggggtgctgtccat
gcctacatgctacacaaacagggcttctcctctttctgcctcgacatcgccatccccagc
ggccaggagcccgatagagtttgctctgagcttcagccggcagcggatatcaagagaaca
gcgagctcgggaggactccaagctacgtcaactccatcgctcagcagcgagcagctgttt
atcatcctccagccgatgctggtgtttatcgggatcatcgatcagctccagagatttttc
aagagccggagtggtagtgccgttagcagcgggagtagcagcagcgccggtggaactacc
aacgatggaactgaggcgtgggaggccaccatgaaggagaagctccgggacgtgagcgcc
atgctcgccttctccaaggatttgctcgagtggctggaggatatgcagagctcggcggat
ctgcaagaggctctggacgtgatgggggctctgggagatgctttctcggctggtttctcg
tcctgcgacgagtttttcagggacgctctcggcctggcatcgctttga
DBGET
integrated database retrieval system