KEGG   Selaginella moellendorffii: SELMODRAFT_405358
Entry
SELMODRAFT_405358 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_405358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_405358
   03110 Chaperones and folding catalysts [BR:smo03110]
    SELMODRAFT_405358
   03029 Mitochondrial biogenesis [BR:smo03029]
    SELMODRAFT_405358
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smo04147]
    SELMODRAFT_405358
Enzymes [BR:smo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SELMODRAFT_405358
Messenger RNA biogenesis [BR:smo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SELMODRAFT_405358
Chaperones and folding catalysts [BR:smo03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SELMODRAFT_405358
Mitochondrial biogenesis [BR:smo03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SELMODRAFT_405358
Exosome [BR:smo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SELMODRAFT_405358
  Exosomal proteins of other body fluids (saliva and urine)
   SELMODRAFT_405358
  Exosomal proteins of breast cancer cells
   SELMODRAFT_405358
  Exosomal proteins of colorectal cancer cells
   SELMODRAFT_405358
  Exosomal proteins of bladder cancer cells
   SELMODRAFT_405358
SSDB
Motif
Pfam: Cpn60_TCP1 Ubiq_cyt_C_chap
Other DBs
NCBI-GeneID: 9655462
NCBI-ProteinID: XP_002963470
JGI: 405358
UniProt: D8QX32
LinkDB
Position
Unknown
AA seq 507 aa
MLEGVNELADAVQVTMGPKGRNVVIELSYGTPKITKDGVTVARSMAFENRVKNVGAALVK
QVANATNAVAGDGTTLATVLARSIFAEGTKSVAAGMNAMDLRRGMNMAVDTVVEYLKSKA
KTISTPTEYAQVASISANGDAEVGDLVAKALEKVGKEGVVTISEGKTLENELEVIDGLKL
DRGYLLTNFITNTRTQKCELDDPLILVHEKKISEASKLKPLLQLVVKLQRPLFIVADDVV
GEALTALVVNKVRAGLKVCVIKAPGFGSYRIDHLLDFIALTGSKLISESTSLKLEDVTVE
MLGNAKKIIVTKDDTIILGAVGDKQVTSQLKKATAKFDKEKLEQRLSRLSGGVAVIKVGG
ASDVEISEKKDRVVDALNSARAAAYEGIVPGGGVALLQASRELDKIKTTNFEEKVGVQII
QNAMKIPAYIIAANAGYEASMVVGKLLEKIENDSFGFDTAQGEYVDMFKAGIVDPVKVLR
RAIQDAVSVSTLLTTTEAVVYPNINQK
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgctggagggagtgaacgagctggccgatgccgtgcaagtgaccatgggtcccaagggg
cgaaacgtcgtgatcgagctgagttatggcactcccaaaatcacaaaggatggagtgact
gttgccaggagcatggctttcgaaaaccgagtaaaaaacgttggggctgctctcgtcaag
caagttgctaatgctaccaatgctgtggcaggggatgggacaactctggcaactgttctt
gcgaggtccatatttgccgaaggcaccaagtccgtggccgctggaatgaacgccatggat
cttcgccgcggcatgaatatggcagtggacacggtggtggagtacctcaagagcaaggcg
aagacgattagcactcctactgaatatgctcaggttgcttcgatctcggccaacggggac
gccgaagtaggagatttggtagccaaggcattggaaaaagtcggcaaagagggtgtcgtc
acaatcagcgagggaaaaacacttgaaaacgagctcgaggttatcgacggtttgaagctg
gacagaggctacttgttaacaaactttatcaccaacaccagaactcagaaatgtgaactc
gatgatcccctcattcttgtgcacgaaaaaaaaatatcggaggctagcaaattgaagcca
ctgcttcaactggtggttaagttgcaaaggccgttgtttatcgttgcggatgatgtggtg
ggcgaagcgttgacggcactagttgttaacaaagtccgcgctggtctcaaggtttgcgtc
ataaaagctcctggattcggcagctatcgaatagatcaccttctcgactttatagccttg
acgggttcaaagcttataagcgaaagcactagtttgaaactcgaggacgtaacagtagaa
atgcttggaaatgcaaagaagattattgtaaccaaagacgacaccatcattttaggtgct
gtgggtgataagcaagtgacatctcagttaaagaaagctactgcgaaatttgacaaggaa
aaactggagcaaagactctccaggttatcgggaggggtagctgtgattaaggtgggtgga
gccagcgacgttgaaatatcggaaaaaaaagatcgagtagtggatgccttgaattctgcg
agagcagctgcttatgaaggaattgtgccaggtggtggagtagctcttcttcaagcctcc
cgtgagcttgataagatcaaaacaacaaattttgaggagaaggttggagttcagatcatt
caaaacgccatgaagatacccgcttatatcatcgccgcaaatgctggatacgaagcatcc
atggttgtagggaaactgctggagaagattgaaaacgatagctttggcttcgacactgct
caaggcgagtacgttgacatgttcaaggcaggcattgtcgacccagtgaaagttttgaga
agggcaatccaggacgctgtcagtgtttcaactctcttgacgacaactgaagcagttgtt
tacccaaatattaaccagaagtaa

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