Selaginella moellendorffii: SELMODRAFT_405493
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Entry
SELMODRAFT_405493 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_405493
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
SELMODRAFT_405493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Phage_scaffold
Motif
Other DBs
NCBI-GeneID:
9654265
NCBI-ProteinID:
XP_002963952
JGI:
405493
UniProt:
D8QYR6
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MAMEEQAKASAAAAAEVDDKQLQEIVRSWILQALSGEDIDRYRKLLSDLKNVDFDDSESV
SGLAARIRALSQCVSIINERDHEMLLSLVFSMSFWSGSNELLDAIENLVVNLATSSGVLV
PRCLDMLVRNFLPPSCGIKVHLDCYTQDRLARKKMTFESLKGLKPLHLSMKNDVMNRVHL
ALQRILELVPIAALRLHPIVQQRMPHRRVDKDWNSLFLENMLLLDSKRVSPAISSRMLLG
IVDRLIEIDVEIAWEDILKDEDSSKVLVFHMDVDESDDKQAAPGSEAQLEHALAAHSGKK
PLDEIADKMDHLMELVFEHLHQCAKNERLDEVYTTLMVSFKSTVLDTYKSKFTQFLIFYL
CSLSPSSCGANFAGFLCETFVTRSIPSNTRMSAAAYLASYLARANFLPLPVVLSSVSRLV
NWCVSFTPTRFDVFKLTDTALHGVFYAACQAVMYILCFRLRELYAESTQRPLLKGLRLQQ
LIEHKLCPLKVCLPSVVEEFVRQATAIQLISYSGTVEPSSGFEVLSFKSYGGDNRLEMFF
PFDPYLLRRSDRFIEPIFTHWSAAHSANEVEEQSSDEEEPVVEEEEVLDPDDLMEAEEEG
YDDGGEEAFRNSLECMSITPPRMLPANLAHMLPIS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaagagcaagcgaaagcgtcggccgcggcggctgcggaagtggacgataag
cagctccaagagattgtgcggtcgtggattttgcaagcgctgtctggggaggacatcgat
cgctatcggaaattgctctcggacttgaaaaacgtcgacttcgatgattcagaaagcgtc
tctggcttggcggcaagaatacgagcgctctcccaatgtgtaagcattatcaacgagcgg
gatcacgagatgctgctatcgcttgtgttttctatgagcttctggagtggtagcaatgag
cttctggatgcaattgagaaccttgtcgtgaatttggcgacttctagcggtgttttggtg
cccagatgcttggacatgctagtgcggaactttttgcctccctcatgtggtatcaaggtg
catcttgactgttatacacaagacaggcttgctagaaaaaagatgacttttgaaagtctt
aaaggactaaaaccgctacatttgtccatgaaaaatgacgtcatgaatcgtgtgcatcta
gctctacaacgaattttggagttggtcccaattgccgctctgaggcttcatccgatcgtc
cagcaaagaatgcctcatcgaagggttgacaaagattggaattctttgtttctggagaat
atgttacttttagatagcaagcgcgttagtccagctataagcagccggatgctgttgggg
atagtcgacaggctgatcgagatagatgtagagatagcttgggaggacattttgaaggat
gaggatagtagcaaagttttggtcttccatatggatgttgatgaatccgatgacaaacaa
gcggctcccggtagtgaggctcaattggagcatgccttagcagcgcattcagggaagaag
cctttagatgaaatagcagataagatggaccatttgatggaactggtttttgagcacttg
catcaatgtgcgaaaaatgaaaggctcgacgaggtgtatacgacactaatggtttctttc
aagtcgactgtccttgacacttacaagtcaaagtttacgcagttcttgatcttctatctg
tgctcgttatctccttcaagttgcggggcgaacttcgctgggtttctttgcgagacattt
gttactcggtctattcccagcaacacaaggatgtctgctgccgcataccttgcgagctac
cttgccagggcaaacttcttacctttgcctgtggtgctttcatccgtttcaaggctagta
aactggtgtgtcagctttactcctacaaggttcgacgtgttcaaattgacagacacagcg
cttcatggagtcttctatgctgcttgtcaggcagtaatgtacattctctgcttcagattg
agggagctttatgcggagtctacgcaaagacccttgctgaaaggcttgagattgcaacag
ctgatagagcacaagctttgccctcttaaggtgtgtcttccctccgtcgtcgaggagttt
gtcaggcaagcgacggcaattcagcttatcagctacagcggcactgtagagcctagctcc
ggattcgaggtcttgtcattcaaatcctatggaggtgacaacaggctagagatgttcttc
ccatttgatccttacttgctgagacgatcggacagatttatcgagccaatcttcacgcac
tggtctgcggctcactcagcaaacgaagtcgaggaacagagcagcgacgaggaggagcct
gttgtggaggaggaagaggtgttagatccggatgatctgatggaggccgaagaggaaggc
tacgatgatggtggcgaggaagcgttccggaattctttggagtgcatgtccatcacgccg
cctcggatgctaccggcgaatttggcacacatgcttccaatctcttga
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